RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 ST13P4Q8IZP2 240 aaPredicted RBP15.37■□□□□ 0.05
LIMK2-204ENST00000406516 MYLPFQ96A32 169 aa15.37■□□□□ 0.05
LIMK2-204ENST00000406516 NXNL1Q96CM4 212 aa15.37■□□□□ 0.05
LIMK2-204ENST00000406516 GCNAQ96QF7 691 aa15.37■□□□□ 0.05
LIMK2-204ENST00000406516 FICDQ9BVA6 458 aa15.37■□□□□ 0.05
LIMK2-204ENST00000406516 SLC2A6Q9UGQ3 507 aa15.37■□□□□ 0.05
LIMK2-204ENST00000406516 ACOT9Q9Y305 439 aa15.37■□□□□ 0.05
LIMK2-204ENST00000406516 XRCC1P18887 633 aaPredicted RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 MRPS22P82650 360 aaKnown RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 PCID2Q5JVF3 399 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 PM20D1Q6GTS8 502 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 DCLRE1AQ6PJP8 1040 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 TMEM86AQ8N2M4 240 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 ATPAF2Q8N5M1 289 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 ICA1LQ8NDH6 482 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 DQX1Q8TE96 717 aaKnown RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 RAD9AQ99638 391 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 TRIM4Q9C037 500 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 TBC1D13Q9NVG8 400 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 RRN3Q9NYV6 651 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 PRPF19Q9UMS4 504 aaKnown RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 PTPRSQ13332 1948 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 FAM95CA0A1B0GW59 222 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 THP07101 528 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 BDNFP23560 247 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 ALDH1A3P47895 512 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 RAB10P61026 200 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 COG7P83436 770 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 XIAPP98170 497 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 FLOT2Q14254 428 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 CWF19L1Q69YN2 538 aaKnown RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 PQLC1Q8N2U9 271 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 RP9Q8TA86 221 aaKnown RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 SERPINI1Q99574 410 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 ATXN3LQ9H3M9 355 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 SLC38A7Q9NVC3 462 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 CDH9Q9ULB4 789 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 AAR2Q9Y312 384 aaKnown RBP15.36■□□□□ 0.05
LIMK2-204ENST00000406516 DTNAQ9Y4J8 743 aa15.36■□□□□ 0.05
LIMK2-204ENST00000406516 AP3B1O00203 1094 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 CASQ2O14958 399 aaPredicted RBP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 HOXA2O43364 376 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 ARHGEF15O94989 841 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 STMN1P16949 149 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 ROR2Q01974 943 aaKnown RBP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 BTG3Q14201 252 aaPredicted RBP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 FBXL19Q6PCT2 694 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 PSMD13Q9UNM6 376 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 INSL6Q9Y581 213 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 COL4A6Q14031 1691 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 CDH23Q9H251 3354 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 TARM1B6A8C7 271 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 STX16-NPEPL1H3BU86 382 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 INPPL1O15357 1258 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 PMPCBO75439 489 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 FAM163BP0C2L3 166 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 SLC1A2P43004 574 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 NSUN2Q08J23 767 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 PDK3Q15120 406 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 UGP2Q16851 508 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 LIN52Q52LA3 116 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 PPHLN1Q8NEY8 458 aaKnown RBP15.35■□□□□ 0.05
LIMK2-204ENST00000406516 ELMO2Q96JJ3 720 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 SH3GL3Q99963 347 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 FIS1Q9Y3D6 152 aa15.35■□□□□ 0.05
LIMK2-204ENST00000406516 ARNTP27540 789 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 PBX3P40426 434 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 PRKAA2P54646 552 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 FOLH1Q04609 750 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 SEPT6Q14141 434 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 CNGA3Q16281 694 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 ZNF423Q2M1K9 1284 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 TIGD5Q53EQ6 642 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 TSTD2Q5T7W7 516 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 OGFRL1Q5TC84 451 aaPredicted RBP15.34■□□□□ 0.05
LIMK2-204ENST00000406516 PRPF38BQ5VTL8 546 aaKnown RBP15.34■□□□□ 0.05
LIMK2-204ENST00000406516 ZNF470Q6ECI4 717 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 DENND5AQ6IQ26 1287 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 ZNF280DQ6N043 979 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 ARHGAP12Q8IWW6 846 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 GPR78Q96P69 363 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 CENPKQ9BS16 269 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 PBX4Q9BYU1 374 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 ZNF385DQ9H6B1 395 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 GLOD4Q9HC38 313 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 VTI1BQ9UEU0 232 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 YBX2Q9Y2T7 364 aaKnown RBP15.34■□□□□ 0.05
LIMK2-204ENST00000406516 CHD9Q3L8U1 2897 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 CHD7Q9P2D1 2997 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 PSMD3O43242 534 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 DPP6P42658 865 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 CHRNA4P43681 627 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 ZNF135P52742 658 aaPredicted RBP15.34■□□□□ 0.05
LIMK2-204ENST00000406516 HK2P52789 917 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 TAS2R39P59534 338 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 CEACAM7Q14002 265 aa15.34■□□□□ 0.05
LIMK2-204ENST00000406516 EML3Q32P44 896 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms