RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 DKK3Q9UBP4 350 aa13.03□□□□□ -0.32
PRAME-206ENST00000406503 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
PRAME-206ENST00000406503 HECTD1Q9ULT8 2610 aa13.03□□□□□ -0.32
PRAME-206ENST00000406503 A0A1W2PQM1 296 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 TSPAN11A1L157 253 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 CYSRT1A8MQ03 144 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
PRAME-206ENST00000406503 KRT10P13645 584 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 GEMIN4P57678 1058 aaKnown RBP13.02□□□□□ -0.33
PRAME-206ENST00000406503 PTK2BQ14289 1009 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 CYTH1Q15438 398 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 TCEA2Q15560 299 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 ALG11Q2TAA5 492 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 WSCD2Q2TBF2 565 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 ARL13BQ3SXY8 428 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 TMEM52BQ4KMG9 183 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 INO80DQ53TQ3 878 aaPredicted RBP13.02□□□□□ -0.33
PRAME-206ENST00000406503 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 TTC7BQ86TV6 843 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 TPCN2Q8NHX9 752 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 TSACCQ96A04 125 aaPredicted RBP13.02□□□□□ -0.33
PRAME-206ENST00000406503 ARHGEF26Q96DR7 871 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 PDFQ9HBH1 243 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 PTPN13Q12923 2485 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 NAV2Q8IVL1 2488 aa13.02□□□□□ -0.33
PRAME-206ENST00000406503 CCDC187A0A096LP49 1063 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 WASH4PA8MWX3 477 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 PES1O00541 588 aaKnown RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 CCP110O43303 1012 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 BUB1O43683 1085 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 TNFSF15O95150 251 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 IGSF6O95976 241 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 ANXA6P08133 673 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 SOX5P35711 763 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 HK3P52790 923 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 PPARDQ03181 441 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 SRSF6Q13247 344 aaKnown RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 SERINC3Q13530 473 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 FAXCQ5TGI0 409 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 SFTPA2Q8IWL1 248 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 WDR36Q8NI36 951 aaKnown RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 CXorf40AQ8TE69 158 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 NAT6Q93015 286 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 CCDC74AQ96AQ1 378 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 LIN37Q96GY3 246 aaPredicted RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 CPEB1Q9BZB8 566 aaKnown RBP13.01□□□□□ -0.33
PRAME-206ENST00000406503 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 NLRC4Q9NPP4 1024 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 PADI4Q9UM07 663 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 HPCAL4Q9UM19 191 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 FLNCQ14315 2725 aa13.01□□□□□ -0.33
PRAME-206ENST00000406503 NBPF19A0A087WUL8 3843 aa13□□□□□ -0.33
PRAME-206ENST00000406503 ZSCAN5CA6NGD5 496 aaPredicted RBP13□□□□□ -0.33
PRAME-206ENST00000406503 RASA4BC9J798 803 aa13□□□□□ -0.33
PRAME-206ENST00000406503 D6RAR5 112 aa13□□□□□ -0.33
PRAME-206ENST00000406503 J3QKU1 62 aa13□□□□□ -0.33
PRAME-206ENST00000406503 TOR1BO14657 336 aa13□□□□□ -0.33
PRAME-206ENST00000406503 RASA4O43374 803 aa13□□□□□ -0.33
PRAME-206ENST00000406503 NOBOXO60393 691 aa13□□□□□ -0.33
PRAME-206ENST00000406503 BUB1BO60566 1050 aaPredicted RBP13□□□□□ -0.33
PRAME-206ENST00000406503 ITGA2BP08514 1039 aa13□□□□□ -0.33
PRAME-206ENST00000406503 KRT3P12035 628 aa13□□□□□ -0.33
PRAME-206ENST00000406503 C6P13671 934 aa13□□□□□ -0.33
PRAME-206ENST00000406503 GM2AP17900 193 aa13□□□□□ -0.33
PRAME-206ENST00000406503 GPD1P21695 349 aa13□□□□□ -0.33
PRAME-206ENST00000406503 EEF1GP26641 437 aaKnown RBP13□□□□□ -0.33
PRAME-206ENST00000406503 RGRP47804 291 aa13□□□□□ -0.33
PRAME-206ENST00000406503 RHOAP61586 193 aa13□□□□□ -0.33
PRAME-206ENST00000406503 RPL7AP62424 266 aaKnown RBP13□□□□□ -0.33
PRAME-206ENST00000406503 SPIDRQ14159 915 aa13□□□□□ -0.33
PRAME-206ENST00000406503 NFATC4Q14934 902 aa13□□□□□ -0.33
PRAME-206ENST00000406503 AGERQ15109 404 aa13□□□□□ -0.33
PRAME-206ENST00000406503 KRT31Q15323 416 aa13□□□□□ -0.33
PRAME-206ENST00000406503 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
PRAME-206ENST00000406503 CDKAL1Q5VV42 579 aa13□□□□□ -0.33
PRAME-206ENST00000406503 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
PRAME-206ENST00000406503 MON1BQ7L1V2 547 aa13□□□□□ -0.33
PRAME-206ENST00000406503 SLFN11Q7Z7L1 901 aa13□□□□□ -0.33
PRAME-206ENST00000406503 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
PRAME-206ENST00000406503 SDR16C5Q8N3Y7 309 aa13□□□□□ -0.33
PRAME-206ENST00000406503 ARL10Q8N8L6 244 aa13□□□□□ -0.33
PRAME-206ENST00000406503 C3orf20Q8ND61 904 aa13□□□□□ -0.33
PRAME-206ENST00000406503 CASKIN2Q8WXE0 1202 aa13□□□□□ -0.33
PRAME-206ENST00000406503 PDXPQ96GD0 296 aa13□□□□□ -0.33
PRAME-206ENST00000406503 SLC13A1Q9BZW2 595 aa13□□□□□ -0.33
PRAME-206ENST00000406503 VPS16Q9H269 839 aa13□□□□□ -0.33
PRAME-206ENST00000406503 LRRC19Q9H756 370 aa13□□□□□ -0.33
PRAME-206ENST00000406503 PCDH12Q9NPG4 1184 aa13□□□□□ -0.33
PRAME-206ENST00000406503 SIRPGQ9P1W8 387 aa13□□□□□ -0.33
PRAME-206ENST00000406503 FZD10Q9ULW2 581 aa13□□□□□ -0.33
PRAME-206ENST00000406503 OR1A2Q9Y585 309 aa13□□□□□ -0.33
PRAME-206ENST00000406503 B8ZZF3 427 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms