RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SLC15A2Q16348 729 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 FOXR1Q6PIV2 292 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 CRISPLD1Q9H336 500 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 OGDHLQ9ULD0 1010 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PRODHO43272 600 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ULK3Q6PHR2 472 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 CNSTQ6PJW8 725 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 MARK2Q7KZI7 788 aaKnown RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ITCHQ96J02 903 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 FNDC11Q9BVV2 318 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 RTFDC1Q9BY42 306 aaPredicted RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 MARK1Q9P0L2 795 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 SSR3Q9UNL2 185 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 SORCS3Q9UPU3 1222 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 MRPS23Q9Y3D9 190 aaKnown RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 TECPR2O15040 1411 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 IRGMA1A4Y4 181 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ZSCAN5CA6NGD5 496 aaPredicted RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ULK1O75385 1050 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 IFNGP01579 166 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PRKAR1AP10644 381 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 KDELR1P24390 212 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 WNT8BQ93098 351 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 GRIP2Q9C0E4 1043 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ABCG4Q9H172 646 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 HOXC12P31275 282 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 FAUP35544 74 aaKnown RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 CSH1P0DML2 217 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 CSH2P0DML3 217 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 KLRK1P26718 216 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 AP5B1Q2VPB7 878 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 OR4A15Q8NGL6 344 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ETNPPLQ8TBG4 499 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 LEF1Q9UJU2 399 aaPredicted RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 FAM92AA1XBS5 289 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 FAM25EA8MYX2 175 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PSMD11O00231 422 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 HAT1O14929 419 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 SLC28A2O43868 658 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 TCEA3O75764 348 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PIGNO95427 931 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ADARP55265 1226 aaKnown RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF846Q147U1 533 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 RGS21Q2M5E4 152 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 MPPE1Q53F39 396 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF563Q8TA94 476 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 MRPS7Q9Y2R9 242 aaKnown RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 G3V2T6 193 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 HDCP19113 662 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ATP4AP20648 1035 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ADAMTSL2Q86TH1 951 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 TTC7BQ86TV6 843 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF558Q96NG5 402 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 A0A0X1KG70 313 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 PLOD3O60568 738 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 OTCP00480 354 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 GRIA4P48058 902 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 CLCN5P51795 746 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 CERS2Q96G23 380 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 FRMD6Q96NE9 622 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 CCDC177Q9NQR7 707 aaPredicted RBP12.11□□□□□ -0.47
SMCR8-201ENST00000406438 ADAM28Q9UKQ2 775 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 CTNNB1P35222 781 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 SULT2A1Q06520 285 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 GAD1Q99259 594 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 TRIM17Q9Y577 477 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 CABYRO75952 493 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 ITGAVP06756 1048 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 PKNOX1P55347 436 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 KLHL35Q6PF15 583 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 GPRIN3Q6ZVF9 776 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 IQCF2Q8IXL9 164 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 GPR156Q8NFN8 814 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 MARK4Q96L34 752 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 KCNS3Q9BQ31 491 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 ARHGAP20Q9P2F6 1191 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 PSMD13Q9UNM6 376 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
SMCR8-201ENST00000406438 RGSL1A5PLK6 1076 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 SLC35G4P0C7Q5 338 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 HGFP14210 728 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 IDO1P14902 403 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
SMCR8-201ENST00000406438 RAB25P57735 213 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 GRB14Q14449 540 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF540Q8NDQ6 660 aa12.11□□□□□ -0.47
SMCR8-201ENST00000406438 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms