RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HLA-DQB2P05538 268 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ODC1P11926 461 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 HNRNPLP14866 589 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF26P17031 533 aaPredicted RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CCR1P32246 355 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ILF2Q12905 390 aaKnown RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CSHL1Q14406 222 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 FAM110CQ1W6H9 321 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 TAF2Q6P1X5 1199 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 BORAQ6PGQ7 559 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 B3GNT6Q6ZMB0 384 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CUZD1Q86UP6 607 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SGF29Q96ES7 293 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 RANBP9Q96S59 729 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 GAD1Q99259 594 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SLC25A23Q9BV35 468 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 TRPC7Q9HCX4 862 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SPAG4Q9NPE6 437 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ABCC13Q9NSE7 274 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 RNF181Q9P0P0 153 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 UTRNP46939 3433 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ARHGAP10A1A4S6 786 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 A8MT66 165 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 TRIM24O15164 1050 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 VILLO15195 856 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 PAGE1O75459 146 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 GPC4O75487 556 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 SNRPB2P08579 225 aaKnown RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 PSMC3P17980 439 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 TCN1P20061 433 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 BDNFP23560 247 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 HOXC8P31273 242 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 SLC26A3P40879 764 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 ATP4BP51164 291 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 RPS6KA3P51812 740 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 APOFQ13790 326 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 FASTKQ14296 549 aaKnown RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 MGAT5BQ3V5L5 792 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 IL23RQ5VWK5 629 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 BTBD8Q5XKL5 378 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 AFMIDQ63HM1 303 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 REP15Q6BDI9 236 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 RBM44Q6ZP01 1051 aaKnown RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 METTL23Q86XA0 190 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 GALNT4Q8N4A0 578 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 C3orf58Q8NDZ4 430 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 EME1Q96AY2 570 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF419Q96HQ0 510 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 SUDS3Q9H7L9 328 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 THEGQ9P2T0 379 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 CACNG4Q9UBN1 327 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 DMTF1Q9Y222 760 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 GIT1Q9Y2X7 761 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 MEIS3P2A8K0S8 358 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 E7ENX8 843 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 PMPCBO75439 489 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 PAPSS2O95340 614 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 MYL3P08590 195 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 NR1H2P55055 460 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 CDKL1Q00532 357 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 NRG1Q02297 640 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 BIRC2Q13490 618 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 SEPT6Q14141 434 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 NADK2Q4G0N4 442 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 TMEM259Q4ZIN3 620 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 PRAMEF19Q5SWL8 479 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 C6orf52Q5T4I8 152 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 FAM45BPQ6NSW5 357 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 METTL25Q8N6Q8 603 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 FAM45AQ8TCE6 357 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 ATP6V1E2Q96A05 226 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 NMD3Q96D46 503 aaKnown RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 HIC2Q96JB3 615 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 UBXN10Q96LJ8 280 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF597Q96LX8 424 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 PRPF18Q99633 342 aaKnown RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 EFHD1Q9BUP0 239 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 OSBPL11Q9BXB4 747 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 RBM38Q9H0Z9 239 aaKnown RBP10.81□□□□□ -0.68
CLIP4-204ENST00000404424 SLC25A51Q9H1U9 297 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 APPL1Q9UKG1 709 aa10.81□□□□□ -0.68
CLIP4-204ENST00000404424 TCRBV3S1A0A5B6 114 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 NEMP2A6NFY4 417 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 WASH4PA8MWX3 477 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 M0QZ92 97 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 CYP11A1P05108 521 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 IMPDH1P20839 514 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 SLC7A1P30825 629 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 EPHX2P34913 555 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 ACADVLP49748 655 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 ATXN3P54252 364 aaPredicted RBP10.8□□□□□ -0.68
CLIP4-204ENST00000404424 TXNL4AP83876 142 aaKnown RBP10.8□□□□□ -0.68
CLIP4-204ENST00000404424 LAMB3Q13751 1172 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 MAPRE1Q15691 268 aaKnown RBP10.8□□□□□ -0.68
CLIP4-204ENST00000404424 UPP1Q16831 310 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 TIGD5Q53EQ6 642 aa10.8□□□□□ -0.68
CLIP4-204ENST00000404424 AGKQ53H12 422 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms