RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 ACTRT2Q8TDY3 377 aa17.08■□□□□ 0.33
DNMT3A-205ENST00000402667 SGF29Q96ES7 293 aa17.08■□□□□ 0.33
DNMT3A-205ENST00000402667 SPATA17Q96L03 361 aa17.08■□□□□ 0.33
DNMT3A-205ENST00000402667 NUF2Q9BZD4 464 aa17.08■□□□□ 0.33
DNMT3A-205ENST00000402667 CCSER2Q9H7U1 834 aa17.08■□□□□ 0.33
DNMT3A-205ENST00000402667 BATF3Q9NR55 127 aa17.08■□□□□ 0.33
DNMT3A-205ENST00000402667 LOC285095A0A1B0GVY8 99 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 TBC1D4O60343 1298 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 HOXD10P28358 340 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 CDC25CP30307 473 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 OR1E1P30953 314 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 RING1Q06587 406 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 ASPHQ12797 758 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 DUSP4Q13115 394 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 CUL3Q13618 768 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 RTP2Q5QGT7 225 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 FUT10Q6P4F1 479 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 TXNDC5Q8NBS9 432 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 CD99L2Q8TCZ2 262 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 RAET1EQ8TD07 263 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 SCG3Q8WXD2 468 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 LENG8Q96PV6 779 aaPredicted RBP17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 CYP4F11Q9HBI6 524 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 VTI1BQ9UEU0 232 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.32
DNMT3A-205ENST00000402667 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 SLCO1B7G3V0H7 640 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ARVCFO00192 962 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 SLC7A4O43246 635 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CCNT2O60583 730 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 GJB3O75712 270 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ATXN1LP0C7T5 689 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ACADSP16219 412 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ABL2P42684 1182 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ARSDP51689 593 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CLCN5P51795 746 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 KPNA2P52292 529 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 BTKQ06187 659 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 LBRQ14739 615 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CILP2Q8IUL8 1156 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 DEFB107AQ8IZN7 70 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 GIPC2Q8TF65 315 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 HDAC10Q969S8 669 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 GPAMQ9HCL2 828 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 GREB1Q4ZG55 1949 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CCL22O00626 93 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 NPHS1O60500 1241 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 TLR5O60602 858 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 LUC7L3O95232 432 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ZDHHC11BP0C7U3 371 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ANPEPP15144 967 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CD1EP15812 388 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 SERPINB5P36952 375 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 PBX3P40426 434 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 EPHB1P54762 984 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 YBEYP58557 167 aaPredicted RBP17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 FAM83EQ2M2I3 478 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 OR6P1Q8NGX9 317 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CNDP1Q96KN2 507 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 SEMA3CQ99985 751 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 CDH22Q9UJ99 828 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ANGPTL2Q9UKU9 493 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 ARHGAP26Q9UNA1 814 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 KCTD3Q9Y597 815 aa17.07■□□□□ 0.32
DNMT3A-205ENST00000402667 NEMP2A6NFY4 417 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 SORBS2O94875 1100 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 JUNP05412 331 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 TACR2P21452 398 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 ATP5F1P24539 256 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 MAPKAPK2P49137 400 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 KCNQ1P51787 676 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 DNAJB13P59910 316 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 NSUN2Q08J23 767 aaKnown RBP eCLIP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 NOGQ13253 232 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 TECRLQ5HYJ1 363 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 ACBD5Q5T8D3 534 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 HECTD2Q5U5R9 776 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 TRIM67Q6ZTA4 783 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 ACAD11Q709F0 780 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 RNF135Q8IUD6 432 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 KDM1BQ8NB78 822 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 RTKNQ9BST9 563 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 MFSD1Q9H3U5 465 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 POMKQ9H5K3 350 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 COMMD8Q9NX08 183 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 G3BP2Q9UN86 482 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-205ENST00000402667 MUSKO15146 869 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 LDB2O43679 373 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PRAMEF11O60813 436 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PDE5AO76074 875 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PIK3R1P27986 724 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 AP2B1P63010 937 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 SLC14A2Q15849 920 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 TMCO4Q5TGY1 634 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 AGAP9Q5VTM2 703 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 TAS1R1Q7RTX1 841 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms