RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 TSPAN3O60637 253 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 CSPG5O95196 566 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 NCF1P14598 390 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-201ENST00000401921 ME2P23368 584 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 CRABP2P29373 138 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 OR1E1P30953 314 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 CA8P35219 290 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 ALDH1A3P47895 512 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 HCAR3P49019 387 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 TUSC3Q13454 348 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 SFT2D3Q587I9 215 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 SMYD5Q6GMV2 418 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 AAGABQ6PD74 315 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 ATG14Q6ZNE5 492 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 CCDC80Q76M96 950 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 SETD3Q86TU7 594 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-201ENST00000401921 ACTRT2Q8TDY3 377 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 SERPINB11Q96P15 392 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 TUBGCP5Q96RT8 1024 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 RTKNQ9BST9 563 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 DRC3Q9H069 523 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 EML4Q9HC35 981 aaKnown RBP7.76□□□□□ -1.17
HDAC9-201ENST00000401921 ZFYVE28Q9HCC9 887 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 PDP2Q9P2J9 529 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 UXTQ9UBK9 157 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-201ENST00000401921 APPL1Q9UKG1 709 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 AURKCQ9UQB9 309 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 TCAF1Q9Y4C2 921 aa7.76□□□□□ -1.17
HDAC9-201ENST00000401921 RGPD3A6NKT7 1758 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 RGPD4Q7Z3J3 1758 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 HEATR9A2RTY3 570 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 GOLGA8CPA6NN73 597 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 KCNU1A8MYU2 1149 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 C9JVG2 144 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SLCO1B7G3V0H7 640 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SCAMP3O14828 347 aaKnown RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 CHRNA1P02708 482 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 PRKCGP05129 697 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 ASGR1P07306 291 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SLC35E2BP0CK96 405 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 ETS2P15036 469 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 FGFR3P22607 806 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 ATP5F1P24539 256 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 CPOXP36551 454 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 THOP1P52888 689 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 BTKQ06187 659 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SLC10A7Q0GE19 358 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 NRF1Q16656 503 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 UPP1Q16831 310 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 CTXN3Q4LDR2 81 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 CLEC6AQ6EIG7 209 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 CFAP52Q8N1V2 620 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 EFHBQ8N7U6 833 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 RSPH1Q8WYR4 309 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 BHMTQ93088 406 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 EXOC2Q96KP1 924 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 B3GALT6Q96L58 329 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 NMUR1Q9HB89 426 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 TBC1D13Q9NVG8 400 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 VTI1BQ9UEU0 232 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 ADAMTS6Q9UKP5 1117 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 DSEQ9UL01 958 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 TMCO1Q9UM00 188 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 ZNF510Q9Y2H8 683 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SF3B1O75533 1304 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 MATN2O00339 956 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 FGF10O15520 208 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 JUNP05412 331 aaKnown RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 XRCC1P18887 633 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 HDCP19113 662 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 GSTT1P30711 240 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SCAPQ12770 1279 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 CBX3Q13185 183 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 FASTKQ14296 549 aaKnown RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 PTPRCAPQ14761 206 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 POLD3Q15054 466 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 ZNF789Q5FWF6 425 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 GPR158Q5T848 1215 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 METTL21CQ5VZV1 264 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 DCP1BQ8IZD4 617 aaKnown RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 RP9Q8TA86 221 aaKnown RBP7.75□□□□□ -1.17
HDAC9-201ENST00000401921 GIPC2Q8TF65 315 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 PSMG2Q969U7 264 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 TSPAN17Q96FV3 270 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 HMCESQ96FZ2 354 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 TBATAQ96M53 351 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 TRAPPC9Q96Q05 1148 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 FCRL5Q96RD9 977 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 SEMA3CQ99985 751 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 KIFC1Q9BW19 673 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 RGS18Q9NS28 235 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 GTF2IRD1Q9UHL9 959 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 FAM50BQ9Y247 325 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 PAPPA2Q9BXP8 1791 aa7.75□□□□□ -1.17
HDAC9-201ENST00000401921 NT5C1B-RDH14C9J2C7 533 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PEX1O43933 1283 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RAMP2O60895 175 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 DUSP11O75319 330 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms