RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 TMEM131Q92545 1883 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 CACNA1HO95180 2353 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 SCN7AQ01118 1682 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 USP34Q70CQ2 3546 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 A0A1W2PQH9 124 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PDZK1P1A8MUH7 402 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 BTNL10A8MVZ5 291 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ENTPD5O75356 428 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 DEAF1O75398 565 aaPredicted RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 IGSF6O95976 241 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 MT-CYBP00156 380 aaPredicted RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 EIF2S1P05198 315 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 SERPINB1P30740 379 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 INHBEP58166 350 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 XRCC4Q13426 336 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 MAPK11Q15759 364 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PTPRNQ16849 979 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 INSCQ1MX18 579 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PABPC1LQ4VXU2 614 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 MON1BQ7L1V2 547 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 APTXQ7Z2E3 356 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 FGD2Q7Z6J4 655 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 FAM228AQ86W67 206 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 TMEM192Q8IY95 271 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 SPATA22Q8NHS9 363 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 FBXO30Q8TB52 745 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ITFG1Q8TB96 612 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 AGAP11Q8TF27 550 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 APBB2Q92870 758 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 TADA1Q96BN2 335 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 CENPTQ96BT3 561 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 LRRC39Q96DD0 335 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PCED1BQ96HM7 432 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 NPAS2Q99743 824 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 EBNA1BP2Q99848 306 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 DCUN1D5Q9BTE7 237 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 REXO4Q9GZR2 422 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 SLC17A7Q9P2U7 560 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ZNF232Q9UNY5 417 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 BTRCQ9Y297 605 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 R3HDM2Q9Y2K5 976 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 AP4S1Q9Y587 144 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 U3KQV3 271 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ZMYM2Q9UBW7 1377 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 EP300Q09472 2414 aaPredicted RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 KANSL1LA0AUZ9 987 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PEX11AO75192 247 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ATG7O95352 703 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 CCNE2O96020 404 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 KRT6AP02538 564 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 KRT6BP04259 564 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ATP5BP06576 529 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 ENO2P09104 434 aaPredicted RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 NFKB1P19838 968 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 HNRNPH3P31942 346 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 PBX1P40424 430 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 HNF4AP41235 474 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PTDSS1P48651 473 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 KRT6CP48668 564 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 RPS7P62081 194 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 AMPD2Q01433 879 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 SLC34A1Q06495 639 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ABRQ12979 859 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 MAPKAPK3Q16644 382 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 DCLRE1AQ6PJP8 1040 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 DSELQ8IZU8 1212 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PYROXD2Q8N2H3 581 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 EIF1ADQ8N9N8 165 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 GPR156Q8NFN8 814 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 OR56A4Q8NGH8 313 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 AZIN2Q96A70 460 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 CLIP3Q96DZ5 547 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PCDHB18PQ96TA0 734 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 AGAP2Q99490 1192 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ACAT2Q9BWD1 397 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 WDR41Q9HAD4 459 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 PAPOLBQ9NRJ5 636 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 SNX15Q9NRS6 342 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 KCNK4Q9NYG8 393 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 LRCH1Q9Y2L9 728 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 NR2E1Q9Y466 385 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 A8MUI8 341 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 KCNH1O95259 989 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 CXCL14O95715 111 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 DLGAP3O95886 979 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 DRD4P21917 467 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 LPOP22079 712 aaPredicted RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 SERPINA4P29622 427 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 HPCAL1P37235 193 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 HSPA13P48723 471 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 NEK3P51956 506 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 CACNA2D1P54289 1103 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 PRKAA2P54646 552 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 CDH13P55290 713 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 JAM2P57087 298 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 MRPS5P82675 430 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 BST1Q10588 318 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 ELAVL2Q12926 359 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 C1DQ13901 141 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 SLC9A5Q14940 896 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms