RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ARMC3Q5W041 872 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 NLGN2Q8NFZ4 835 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF671Q8TAW3 534 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM81AQ8TBF8 368 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 KBTBD7Q8WVZ9 684 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TMEM125Q96AQ2 219 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 LMAN2LQ9H0V9 348 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TMPRSS4Q9NRS4 437 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 CATSPERZQ9NTU4 200 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 RRN3Q9NYV6 651 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ERVW-1Q9UQF0 538 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 SDR42E2A6NKP2 422 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TPBGLP0DKB5 382 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 NT5EP21589 574 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 MAN2A2P49641 1150 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TSNQ15631 228 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 LONRF1Q17RB8 773 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 MLIPQ5VWP3 458 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ARHGEF19Q8IW93 802 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 SYNPOQ8N3V7 929 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 CATSPER1Q8NEC5 780 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 FEM1CQ96JP0 617 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM126AQ9BYI3 521 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 FRMD8Q9BZ67 464 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 PHF11Q9UIL8 331 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ADAM30Q9UKF2 790 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 STX11O75558 287 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ACADSP16219 412 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 NDUFAF6Q330K2 333 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 PAGE2Q7Z2X7 111 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 SAMD3Q8N6K7 520 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ABHD5Q8WTS1 349 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 THRSPQ92748 146 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TP53INP1Q96A56 240 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 MIEF2Q96C03 454 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 CMTM5Q96DZ9 223 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TRNT1Q96Q11 434 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 PACSIN1Q9BY11 444 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 CHMP1AQ9HD42 196 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 OPTCQ9UBM4 332 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 CDY1Q9Y6F8 540 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TM9SF1O15321 606 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 SSNA1O43805 119 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM20BO75063 409 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 TRAF2Q12933 501 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 NAB2Q15742 525 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 RAB11FIP2Q7L804 512 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 UBE2Q1Q7Z7E8 422 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 RAVER1Q8IY67 606 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 USP38Q8NB14 1042 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 RAD51AP1Q96B01 352 aa11.04□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF185O15231 689 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 SGPL1O95470 568 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 IDSP22304 550 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 VARSP26640 1264 aaKnown RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 CRATP43155 626 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 MTTPP55157 894 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 RIBC1Q8N443 379 aaPredicted RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 FBXO39Q8N4B4 442 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 LMX1AQ8TE12 382 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 SCLYQ96I15 445 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 GPER1Q99527 375 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 PDCD2LQ9BRP1 358 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 MCUBQ9NWR8 336 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 TAS2R13Q9NYV9 303 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 TMCO1Q9UM00 188 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 MRPS7Q9Y2R9 242 aaKnown RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 HES2Q9Y543 173 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 KLK3P07288 261 aaPredicted RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 SERPINB5P36952 375 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 SCTRP47872 440 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 PDCD4Q53EL6 469 aaKnown RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 CERCAMQ5T4B2 595 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 UBE2J2Q8N2K1 259 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 EMC1Q8N766 993 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 GPR156Q8NFN8 814 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 TRMT61BQ9BVS5 477 aaKnown RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 RPL26L1Q9UNX3 145 aaKnown RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 DUSP10Q9Y6W6 482 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 IL33O95760 270 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 COMTP21964 271 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 HSD17B3P37058 310 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 DLG1Q12959 904 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 TTC33Q6PID6 262 aaPredicted RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 CASKO14936 926 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 BAIAP3O94812 1187 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 MC1RQ01726 317 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 MAD2L1Q13257 205 aaPredicted RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 BEND7Q8N7W2 519 aaPredicted RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM98AQ8NCA5 519 aaKnown RBP11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 FIG4Q92562 907 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 A0A087X0B3 334 aa11.03□□□□□ -0.64
CACNA1C-216ENST00000399638 CCKBRP32239 447 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms