RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ZNF571Q7Z3V5 609 aaPredicted RBP8□□□□□ -1.13
USP47-203ENST00000399455 OR4L1Q8NH43 312 aa8□□□□□ -1.13
USP47-203ENST00000399455 SHC3Q92529 594 aa8□□□□□ -1.13
USP47-203ENST00000399455 AP2M1Q96CW1 435 aa8□□□□□ -1.13
USP47-203ENST00000399455 FAXDC2Q96IV6 333 aa8□□□□□ -1.13
USP47-203ENST00000399455 KCTD14Q9BQ13 255 aaPredicted RBP8□□□□□ -1.13
USP47-203ENST00000399455 NRDE2Q9H7Z3 1164 aa8□□□□□ -1.13
USP47-203ENST00000399455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8□□□□□ -1.13
USP47-203ENST00000399455 CA14Q9ULX7 337 aa8□□□□□ -1.13
USP47-203ENST00000399455 PHTF1Q9UMS5 762 aa8□□□□□ -1.13
USP47-203ENST00000399455 VPS4AQ9UN37 437 aa8□□□□□ -1.13
USP47-203ENST00000399455 MCIDASD6RGH6 385 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ZNF682O95780 498 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 RGPD1P0DJD0 1748 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ADRA1DP25100 572 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 KCNJ1P48048 391 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CHRNB3Q05901 458 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 EEF1DP3Q658K8 133 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 GALNT18Q6P9A2 607 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 P4HA3Q7Z4N8 544 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 FAM228AQ86W67 206 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 TEX9Q8N6V9 391 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ACTL9Q8TC94 416 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 MTFMTQ96DP5 389 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 SUSD3Q96L08 255 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SLITRK2Q9H156 845 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ETNK2Q9NVF9 386 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CFAP73A6NFT4 308 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SNUPNO95149 360 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 CXCR3P49682 368 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 RUNX1T1Q06455 604 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ENPEPQ07075 957 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 GPAT3Q53EU6 434 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CARD16Q5EG05 197 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 DNAJB7Q7Z6W7 309 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 FAM20CQ8IXL6 584 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 LIX1Q8N485 282 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 PHOSPHO2Q8TCD6 241 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 OVCA2Q8WZ82 227 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 HAS1Q92839 578 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 LRRC39Q96DD0 335 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 MCCC2Q9HCC0 563 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 GALNT8Q9NY28 637 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 COQ6Q9Y2Z9 468 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 LTA4HP09960 611 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 NEK3P51956 506 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 RFTN1Q14699 578 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 HYIQ5T013 277 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 IL27RAQ6UWB1 636 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 VN1R5Q7Z5H4 357 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 PHF13Q86YI8 300 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 MIER2Q8N344 545 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 FAM98AQ8NCA5 519 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 SELENOMQ8WWX9 145 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ATG4AQ8WYN0 398 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SLC22A18Q96BI1 424 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 TRIM4Q9C037 500 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CDH7Q9ULB5 785 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 MYOM1P52179 1685 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 LRRC37A3O60309 1634 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SLC31A1O15431 190 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 PSMB4P28070 264 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 STXBP1P61764 594 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 ECT2LQ008S8 904 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 BMPR2Q13873 1038 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 AMZ1Q400G9 498 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 LRRC38Q5VT99 294 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CYP2U1Q7Z449 544 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ZNF563Q8TA94 476 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 P2RY13Q9BPV8 354 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SIKE1Q9BRV8 207 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 AGXT2Q9BYV1 514 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 MCOLN1Q9GZU1 580 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 GOLGA2P5Q9HBQ8 144 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 RBM12Q9NTZ6 932 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 ABCB8Q9NUT2 735 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 RCOR3Q9P2K3 495 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 C19orf25Q9UFG5 118 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 CACNA1FO60840 1977 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 TIPRLO75663 272 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CHN1P15882 459 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 RPL17P18621 184 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 IL12BP29460 328 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 PSMD4P55036 377 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 DMWDQ09019 674 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 MAMLD1Q13495 774 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 NCF4Q15080 339 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 INTS11Q5TA45 600 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 GRASPQ7Z6J2 395 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 PLD3Q8IV08 490 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 OR52L1Q8NGH7 329 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 PAFAH2Q99487 392 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SNRNP25Q9BV90 132 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 SLC4A5Q9BY07 1137 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 POMKQ9H5K3 350 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 SLC35G6P0C7Q6 338 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 BUD31P41223 144 aaPredicted RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 CDK7P50613 346 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CCT8P50990 548 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 CLCN6P51797 869 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms