RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 B4GALNT2Q8NHY0 566 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 SHKBP1Q8TBC3 707 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 ALKBH8Q96BT7 664 aaKnown RBP15.28■□□□□ 0.04
COL25A1-201ENST00000399126 SMIM14Q96QK8 99 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 ACE2Q9BYF1 805 aaPredicted RBP15.28■□□□□ 0.04
COL25A1-201ENST00000399126 CERS4Q9HA82 394 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 UBA2Q9UBT2 640 aaPredicted RBP15.28■□□□□ 0.04
COL25A1-201ENST00000399126 MAGEB16A2A368 324 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 FESP07332 822 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 GP5P40197 560 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 SERPINB9P50453 376 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 DENND6AQ8IWF6 608 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
COL25A1-201ENST00000399126 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
COL25A1-201ENST00000399126 CAB39LQ9H9S4 337 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 VPS45Q9NRW7 570 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 KCTD3Q9Y597 815 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 HELZP42694 1942 aaKnown RBP15.27■□□□□ 0.04
COL25A1-201ENST00000399126 MOSPD3O75425 235 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 RASSF9O75901 435 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 CCNFP41002 786 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 PDAP1Q13442 181 aaKnown RBP15.27■□□□□ 0.04
COL25A1-201ENST00000399126 DLG2Q15700 870 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 TSNAXIP1Q2TAA8 658 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 POTEHQ6S545 545 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 SETD3Q86TU7 594 aaPredicted RBP15.27■□□□□ 0.04
COL25A1-201ENST00000399126 RBM23Q86U06 439 aaKnown RBP15.27■□□□□ 0.04
COL25A1-201ENST00000399126 KIRREL3Q8IZU9 778 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 ELMOD1Q8N336 334 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 ARL10Q8N8L6 244 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 MTBPQ96DY7 904 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 RBBP8Q99708 897 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 MECRQ9BV79 373 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
COL25A1-201ENST00000399126 DNMT3BQ9UBC3 853 aaKnown RBP15.27■□□□□ 0.04
COL25A1-201ENST00000399126 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.27■□□□□ 0.04
COL25A1-201ENST00000399126 LEFTY2O00292 366 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 BUD23O43709 281 aaKnown RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 BMP1P13497 986 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 GABRB3P28472 473 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 SLC8A1P32418 973 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 CSKP41240 450 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 RANBP1P43487 201 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 ARCN1P48444 511 aaKnown RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 SERPINH1P50454 418 aaKnown RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 SCNN1BP51168 640 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 IRX4P78413 519 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 SLC7A9P82251 487 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 CTBP1Q13363 440 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 PDE1CQ14123 709 aaPredicted RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 PTPRCAPQ14761 206 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 CYTH1Q15438 398 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 TEAD2Q15562 447 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 SEPT7Q16181 437 aaKnown RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 PDK4Q16654 411 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 GKAP1Q5VSY0 366 aaPredicted RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 DCLK2Q8N568 766 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 CPNE1Q99829 537 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 MGME1Q9BQP7 344 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 CINPQ9BW66 212 aaPredicted RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 ARNT2Q9HBZ2 717 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 TREX1Q9NSU2 369 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 GGT7Q9UJ14 662 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 ITM2BQ9Y287 266 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 MTO1Q9Y2Z2 717 aaKnown RBP15.27■□□□□ 0.03
COL25A1-201ENST00000399126 HCFC2Q9Y5Z7 792 aa15.27■□□□□ 0.03
COL25A1-201ENST00000399126 TRAV19A0A0A6YYK7 116 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 TM9SF1O15321 606 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 MT-CO1P00395 513 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 TPP2P29144 1249 aaPredicted RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 MPP1Q00013 466 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 PDE1BQ01064 536 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 CAPRIN2Q6IMN6 1127 aaKnown RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 FSTL4Q6MZW2 842 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 ZCCHC8Q6NZY4 707 aaKnown RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 C16orf46Q6P387 395 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 DDI1Q8WTU0 396 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 PSKH2Q96QS6 385 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 FEM1AQ9BSK4 669 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 LOC285095A0A1B0GVY8 99 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 AP3B1O00203 1094 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 DHRS4L1P0CG22 281 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 CDC25CP30307 473 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 CDH18Q13634 790 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 FXNQ16595 210 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 GPR158Q5T848 1215 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 APCDD1Q8J025 514 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 HJURPQ8NCD3 748 aaPredicted RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 ZNF599Q96NL3 588 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 PPP1R2P1Q96PQ5 205 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 DDX50Q9BQ39 737 aaKnown RBP15.26■□□□□ 0.03
COL25A1-201ENST00000399126 SEPT3Q9UH03 358 aa15.26■□□□□ 0.03
COL25A1-201ENST00000399126 VPS28Q9UK41 221 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms