RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SERPINF2P08697 491 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CES1P23141 567 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CD6P30203 668 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RPL22P35268 128 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NEK3P51956 506 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GRM3Q14832 879 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLC14A2Q15849 920 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 P3H1Q32P28 736 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FAXCQ5TGI0 409 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KBTBD6Q86V97 674 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PIH1D2Q8WWB5 315 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PPP1R16AQ96I34 528 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PRRX2Q99811 253 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 OMDQ99983 421 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 HOMER3Q9NSC5 361 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CHKBQ9Y259 395 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCDHB9Q9Y5E1 797 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 VPS13AQ96RL7 3174 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CEP192Q8TEP8 1941 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DOCK9Q9BZ29 2069 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SPAG17Q6Q759 2223 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 UPK3BL1B0FP48 263 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 UPK3BL2E5RIL1 263 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KIF2AO00139 706 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PMPCBO75439 489 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RPP40O75818 363 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZNF189O75820 626 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CPP00450 1065 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 IFNB1P01574 187 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FNTAP49354 379 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 WNT3AP56704 352 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PPP2CBP62714 309 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PPP2CAP67775 309 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SEMG2Q02383 582 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 OLIG2Q13516 323 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 UGP2Q16851 508 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PLK5Q496M5 336 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KCTD11Q693B1 232 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 BRAT1Q6PJG6 821 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZNF572Q7Z3I7 529 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLC41A1Q8IVJ1 513 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GANCQ8TET4 914 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MRGPRX2Q96LB1 330 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CDC23Q9UJX2 597 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 THADAQ6YHU6 1953 aa12.5□□□□□ -0.41
HLA-DQB1-203ENST00000399082 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LOC285095A0A1B0GVY8 99 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 AP1G1O43747 822 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 URI1O94763 535 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 STK10O94804 968 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SEMA4FO95754 770 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TUBB4AP04350 444 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 IGHV4-34P06331 123 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LHCGRP22888 699 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 OXTRP30559 389 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ADRA1AP35348 466 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MMP12P39900 470 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PTGIRP43119 386 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CHRNA4P43681 627 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RALGDSQ12967 914 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCSK7Q16549 785 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 QPCTQ16769 361 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PARP6Q2NL67 630 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ARMC12Q5T9G4 340 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PMS2CLQ68D20 193 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FBXL19Q6PCT2 694 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 OR14C36Q8NHC7 312 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ATL2Q8NHH9 583 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLCO2A1Q92959 643 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MCCC1Q96RQ3 725 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ORAI3Q9BRQ5 295 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GPR174Q9BXC1 333 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KCNH6Q9H252 994 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 EBF2Q9HAK2 575 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ETNK1Q9HBU6 452 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SGK2Q9HBY8 427 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DYRK4Q9NR20 520 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms