RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 WBP4O75554 376 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CCNCP24863 283 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CRABP2P29373 138 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 RGS2P41220 211 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SLC1A2P43004 574 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 MAPK9P45984 424 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 AFF1P51825 1210 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 STX5Q13190 355 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 FSCN1Q16658 493 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 FAM83EQ2M2I3 478 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PKDCCQ504Y2 493 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 GPR158Q5T848 1215 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 MARC1Q5VT66 337 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TMEM86AQ8N2M4 240 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CNTD1Q8N815 330 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SLC45A3Q96JT2 553 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 NR1H4Q96RI1 486 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 MAF1Q9H063 256 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PCDHAC1Q9H158 963 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 DNAJC25-GNG10A0A024R161 153 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 GNGT2O14610 69 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ANGPT2O15123 496 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TADA2AO75478 443 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 RBP1P09455 135 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 HSPA8P11142 646 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 HARS2P49590 506 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 THOP1P52888 689 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 OXCT1P55809 520 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 KCNK10P57789 538 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF789Q5FWF6 425 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 LIPMQ5VYY2 423 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ABI1Q8IZP0 508 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 OR13C4Q8NGS5 318 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CASP10Q92851 521 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 OXSMQ9NWU1 459 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PSMD13Q9UNM6 376 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TIMM22Q9Y584 194 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PLCH1Q4KWH8 1693 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ERI2A8K979 691 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 RNASEH1O60930 286 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 LINC00032P0C843 101 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SLC2A3P11169 496 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 NAPRTQ6XQN6 538 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SH2D5Q6ZV89 423 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SATL1Q86VE3 508 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PDZD8Q8NEN9 1154 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 STYXQ8WUJ0 223 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TRAPPC9Q96Q05 1148 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SIKE1Q9BRV8 207 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 BRD8Q9H0E9 1235 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 RRAGCQ9HB90 399 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 DMAP1Q9NPF5 467 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ENTPD7Q9NQZ7 604 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 NDFIP2Q9NV92 336 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 GMPR2Q9P2T1 348 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 AP4S1Q9Y587 144 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF638Q14966 1978 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 C15orf38-AP3S2A0A0A6YYH1 394 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 CAPN14A8MX76 684 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 DCLK1O15075 740 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 GLP2RO95838 553 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 CHEK2O96017 543 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 PSMC3P17980 439 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 DLG1Q12959 904 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 MFSD14CQ5VZR4 134 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 MAMDC4Q6UXC1 1216 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 MAVSQ7Z434 540 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 ARPINQ7Z6K5 226 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 LINC01465Q8N7H1 131 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 OR52K2Q8NGK3 314 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 RNF217Q8TC41 542 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 PKP2Q99959 881 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 TRIM15Q9C019 465 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 TRIM36Q9NQ86 728 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 EIF2B3Q9NR50 452 aaKnown RBP4.96□□□□□ -1.61
SMAD4-202ENST00000398417 ABCC13Q9NSE7 274 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 OLA1Q9NTK5 396 aaKnown RBP4.96□□□□□ -1.61
SMAD4-202ENST00000398417 FAM8A1Q9UBU6 413 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 GNEQ9Y223 722 aaKnown RBP4.96□□□□□ -1.61
SMAD4-202ENST00000398417 PCDHB5Q9Y5E4 795 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 SF3B1O75533 1304 aaKnown RBP eCLIP4.96□□□□□ -1.616e-6■■■■■ 89.4
SMAD4-202ENST00000398417 XIRP2A4UGR9 3374 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 F8W810 466 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 AGRPO00253 132 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 GRID2O43424 1007 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 PFDN1O60925 122 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 IL1BP01584 269 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 SLC5A3P53794 718 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 CAPRIN1Q14444 709 aaKnown RBP4.96□□□□□ -1.61
SMAD4-202ENST00000398417 MTX3Q5HYI7 312 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 SPPL2CQ8IUH8 684 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 CEP97Q8IW35 865 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 PQLC1Q8N2U9 271 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 RDH11Q8TC12 318 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 ACTRT2Q8TDY3 377 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 CENPIQ92674 756 aaPredicted RBP4.96□□□□□ -1.61
SMAD4-202ENST00000398417 VPS50Q96JG6 964 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 TBATAQ96M53 351 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 EGFL8Q99944 293 aa4.96□□□□□ -1.61
SMAD4-202ENST00000398417 HAUS8Q9BT25 410 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms