RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TREML1Q86YW5 311 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 C19orf18Q8NEA5 215 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 RNF19AQ9NV58 838 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 MRPL42Q9Y6G3 142 aaKnown RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 SNTNA6NMZ2 147 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PRR23D1E9PI22 279 aaPredicted RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 GPIP06744 558 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PRR23D2P0DMB1 279 aaPredicted RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 GNAZP19086 355 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 OR1E1P30953 314 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 ITGA7Q13683 1181 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 NFE2Q16621 373 aaPredicted RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 CEP78Q5JTW2 689 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PDZK1Q5T2W1 519 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PMF1Q6P1K2 205 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 GALNT18Q6P9A2 607 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 KRT73Q86Y46 540 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 HM13Q8TCT9 377 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 DDX1Q92499 740 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 EPB41L1Q9H4G0 881 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 DNAAF2Q9NVR5 837 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
HPS4-202ENST00000398145 EFCAB10A6NFE3 127 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 ASLP04424 464 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 GJB1P08034 283 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 LINC00032P0C843 101 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 ARL2P36404 184 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PTPN9P43378 593 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 TBX4P57082 545 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 SEMA5AQ13591 1074 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 FAM187BQ17R55 369 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 SCIMPQ6UWF3 145 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 SLCO6A1Q86UG4 719 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PROSER1Q86XN7 944 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 HPS1Q92902 700 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 C19orf60Q96EN9 201 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 SENP8Q96LD8 212 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 GPR88Q9GZN0 384 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 POLR1EQ9GZS1 481 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 MAGEL2Q9UJ55 1249 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 COQ6Q9Y2Z9 468 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 HES2Q9Y543 173 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 CASTOR2A6NHX0 329 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 BUD23O43709 281 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 SLC22A3O75751 556 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 OAS1P00973 400 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 EIF2S1P05198 315 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 IL12RB1P42701 662 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 SLC9B1Q4ZJI4 515 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 CELF3Q5SZQ8 465 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 STXBP5Q5T5C0 1151 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 OVOS1Q6IE37 1185 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 OLFML1Q6UWY5 402 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 PLPPR4Q7Z2D5 763 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 CDYL2Q8N8U2 506 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 LPCAT1Q8NF37 534 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 MIPEPQ99797 713 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
HPS4-202ENST00000398145 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
HPS4-202ENST00000398145 C17orf102A2RUQ5 167 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 PABPC4LP0CB38 370 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZNF7P17097 686 aaPredicted RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 IVDP26440 423 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CD86P42081 329 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 HALP42357 657 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 IDH2P48735 452 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 POLD2P49005 469 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 DLG2Q15700 870 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CMPK2Q5EBM0 449 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 WSCD1Q658N2 575 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 GCNT7Q6ZNI0 430 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 THAP5Q7Z6K1 395 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZNF605Q86T29 641 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 LRRC49Q8IUZ0 686 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 TPD52L3Q96J77 140 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 SPATA17Q96L03 361 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 RMI1Q9H9A7 625 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZNF358Q9NW07 568 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ENOPH1Q9UHY7 261 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 LSM7Q9UK45 103 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 FAM159BA6NKW6 160 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 H3BSA7 217 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 DBTP11182 482 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 CKMT2P17540 419 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 PTPRAP18433 802 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms