RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 ATG14Q6ZNE5 492 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 JAMLQ86YT9 394 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 FSTL5Q8N475 847 aaPredicted RBP16.31■□□□□ 0.2
CUX2-202ENST00000397643 OR2AP1Q8NGE2 309 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 ARHGEF2Q92974 986 aaKnown RBP16.31■□□□□ 0.2
CUX2-202ENST00000397643 ARHGEF26Q96DR7 871 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 VPS16Q9H269 839 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 NDST4Q9H3R1 872 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 SIX2Q9NPC8 291 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 SIRPGQ9P1W8 387 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 PPARGC1AQ9UBK2 798 aaKnown RBP16.31■□□□□ 0.2
CUX2-202ENST00000397643 GULP1Q9UBP9 304 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 NEU3Q9UQ49 428 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 PCDHGA4Q9Y5G9 962 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 UNC13CQ8NB66 2214 aa16.31■□□□□ 0.2
CUX2-202ENST00000397643 TOR1BO14657 336 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 NVLO15381 856 aaKnown RBP16.3■□□□□ 0.2
CUX2-202ENST00000397643 MMP20O60882 483 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 GSRP00390 522 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 RPLP0P05388 317 aaKnown RBP16.3■□□□□ 0.2
CUX2-202ENST00000397643 ITIH2P19823 946 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 CDH5P33151 784 aaPredicted RBP16.3■□□□□ 0.2
CUX2-202ENST00000397643 GABRB2P47870 512 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 HK3P52790 923 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 SNX16P57768 344 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 PTK2Q05397 1052 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 ALG11Q2TAA5 492 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 MANEALQ5VSG8 457 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 SMYD5Q6GMV2 418 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 NLRP14Q86W24 1093 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 FAM131BQ86XD5 332 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 KLHL32Q96NJ5 620 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 EPAS1Q99814 870 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 SEMA3CQ99985 751 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 CPEB1Q9BZB8 566 aaKnown RBP16.3■□□□□ 0.2
CUX2-202ENST00000397643 STRADBQ9C0K7 418 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 PISDQ9UG56 409 aa16.3■□□□□ 0.2
CUX2-202ENST00000397643 LRRK1Q38SD2 2015 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 TMX2-CTNND1H3BSU7 103 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 KRIT1O00522 736 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 TM7SF2O76062 418 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 ITIH1P19827 911 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 PON1P27169 355 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 KRT9P35527 623 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 FANCCQ00597 558 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 IRF4Q15306 451 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 TCEA2Q15560 299 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 MYLK3Q32MK0 819 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 MIIPQ5JXC2 388 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
CUX2-202ENST00000397643 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
CUX2-202ENST00000397643 KCTD16Q68DU8 428 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 VASH2Q86V25 355 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 XYLT1Q86Y38 959 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 RYBPQ8N488 228 aaPredicted RBP16.29■□□□□ 0.2
CUX2-202ENST00000397643 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 TSACCQ96A04 125 aaPredicted RBP16.29■□□□□ 0.2
CUX2-202ENST00000397643 ARHGAP9Q9BRR9 750 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 OSBPL1AQ9BXW6 950 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 EDEM3Q9BZQ6 932 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 LRRN3Q9H3W5 708 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 TMEM51Q9NW97 253 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 FOXJ2Q9P0K8 574 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 TMEM59LQ9UK28 342 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 LOXL2Q9Y4K0 774 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 NBPF19A0A087WUL8 3843 aa16.29■□□□□ 0.2
CUX2-202ENST00000397643 NBASA2RRP1 2371 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 PRAMEF33A0A0G2JMD5 474 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 FAM170AA1A519 330 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 LGALS16A8MUM7 142 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 FOXN3O00409 490 aaPredicted RBP16.28■□□□□ 0.2
CUX2-202ENST00000397643 PRAMEF10O60809 474 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 POP4O95707 220 aaKnown RBP16.28■□□□□ 0.2
CUX2-202ENST00000397643 ALPIP09923 528 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 JMJD7P0C870 316 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 ETV5P41161 510 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 BLKP51451 505 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
CUX2-202ENST00000397643 ELOCQ15369 112 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 TBR1Q16650 682 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 EXOC3L4Q17RC7 722 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 WSCD2Q2TBF2 565 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 RAB6CQ53S08 254 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 LEKR1Q6ZMV7 388 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 DTX1Q86Y01 620 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 GPR156Q8NFN8 814 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 C18orf8Q96DM3 657 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 CFAP57Q96MR6 1250 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 TMEM74Q96NL1 305 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 C1QTNF7Q9BXJ2 289 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 RAB6CQ9H0N0 254 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 GPR34Q9UPC5 381 aa16.28■□□□□ 0.2
CUX2-202ENST00000397643 GTPBP10A4D1E9 387 aaKnown RBP16.27■□□□□ 0.2
CUX2-202ENST00000397643 TPM3P06753 285 aa16.27■□□□□ 0.2
CUX2-202ENST00000397643 TIMP2P16035 220 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms