RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 LY6DQ14210 128 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 POLD3Q15054 466 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 ARL13BQ3SXY8 428 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 PRRT3Q5FWE3 981 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 TPRG1LQ5T0D9 272 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 FAM102AQ5T9C2 384 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 FAXCQ5TGI0 409 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 ESRP1Q6NXG1 681 aaKnown RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 LVRNQ6Q4G3 990 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 TTC7BQ86TV6 843 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 XYLT1Q86Y38 959 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SLC35F3Q8IY50 421 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SDR16C5Q8N3Y7 309 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 RYBPQ8N488 228 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 MSANTD4Q8NCY6 345 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 CCNL2Q96S94 520 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 C1QTNF7Q9BXJ2 289 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 OSBPL1AQ9BXW6 950 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SLC13A1Q9BZW2 595 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SEMA4CQ9C0C4 833 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 MAGEH1Q9H213 219 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 ZDHHC6Q9H6R6 413 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SIX2Q9NPC8 291 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 PLCB1Q9NQ66 1216 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 OR12D3Q9UGF7 316 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 TMEM59LQ9UK28 342 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 PADI4Q9UM07 663 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 TP53BP1Q12888 1972 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 RP1P56715 2156 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 FLNCQ14315 2725 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 TMEM110-MUSTN1A8MSY1 372 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 KRIT1O00522 736 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 MUSKO15146 869 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 GJB6O95452 261 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 LSM8O95777 96 aaKnown RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 CYP11B1P15538 503 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 RHOQP17081 205 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 ADRA1BP35368 520 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 FLT3P36888 993 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 EIF4A3P38919 411 aaKnown RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PTGIRP43119 386 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 MTIF2P46199 727 aaKnown RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 MAPKAPK2P49137 400 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PEX5P50542 639 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 SUOXP51687 545 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PPARDQ03181 441 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 RAD51Q06609 339 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 EIF3IQ13347 325 aaKnown RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 C1orf61Q13536 156 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 SPIDRQ14159 915 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 ELOCQ15369 112 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PERM1Q5SV97 790 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 GDPD4Q6W3E5 623 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 FAM131BQ86XD5 332 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 DRC7Q8IY82 874 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PHACTR4Q8IZ21 702 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 FSTL5Q8N475 847 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 OR6C4Q8NGE1 309 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 OR2AP1Q8NGE2 309 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 HCAR2Q8TDS4 363 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 CASKIN2Q8WXE0 1202 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 ARHGEF2Q92974 986 aaKnown RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 LIN37Q96GY3 246 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 KLHL32Q96NJ5 620 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 TM6SF2Q9BZW4 377 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 CLPBQ9H078 707 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 TCEAL2Q9H3H9 227 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 CLMPQ9H6B4 373 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 APOBEC3BQ9UH17 382 aaKnown RBP8.87□□□□□ -0.99
CAPN3-208ENST00000397204 MFHAS1Q9Y4C4 1052 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PCDHGA7Q9Y5G6 932 aa8.87□□□□□ -0.99
CAPN3-208ENST00000397204 PTPN13Q12923 2485 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 ZSCAN5CA6NGD5 496 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 GOLGA8SH3BPF8 625 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 NTN3O00634 580 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 PLD2O14939 933 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 EFSO43281 561 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 KDELR3O43731 214 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 MMP20O60882 483 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 TM7SF2O76062 418 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 WISP1O95388 367 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 UGT2B4P06133 528 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 ALPIP09923 528 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 TSHRP16473 764 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 GKP32189 559 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 ACVRL1P37023 503 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 INHBCP55103 352 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 CLN3Q13286 438 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 BECN1Q14457 450 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 DRAP1Q14919 205 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 MAN2A1Q16706 1144 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 INO80DQ53TQ3 878 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 MANEALQ5VSG8 457 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 KIAA1614Q5VZ46 1190 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 RWDD4Q6NW29 188 aaKnown RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 DPY19L2P1Q6NXN4 242 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 CRTC1Q6UUV9 634 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 MACC1Q6ZN28 852 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms