RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ETNK2Q9NVF9 386 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 RWDD3Q9Y3V2 267 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 FAM25EA8MYX2 175 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 VHLP40337 213 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 TTPAP49638 278 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 PCID2Q5JVF3 399 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 CENPIQ92674 756 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 PDCD10Q9BUL8 212 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 BHLHE41Q9C0J9 482 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 C11orf49Q9H6J7 331 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 LRRC72A6NJI9 287 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 SULT2A1Q06520 285 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 CCINQ13939 588 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 NEDD8Q15843 81 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PLEKHA7Q6IQ23 1121 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 CADM2Q8N3J6 435 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 FAR1Q8WVX9 515 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 APBB2Q92870 758 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 TNPO3Q9Y5L0 923 aaKnown RBP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 COLEC10Q9Y6Z7 277 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 TPP2P29144 1249 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 SSR2P43308 183 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 JAZF1Q86VZ6 243 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 FNDC11Q9BVV2 318 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 MAGEB3O15480 346 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 GZMAP12544 262 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 KCNA5P22460 613 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PRKG2Q13237 762 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 MAPK11Q15759 364 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PTPN20Q4JDL3 420 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PRMT9Q6P2P2 845 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 TMC5Q6UXY8 1006 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 TMPRSS11BQ86T26 416 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 KYQ8NBH2 561 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 RNF121Q9H920 327 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 SGK2Q9HBY8 427 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PSMD9O00233 223 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 FPGSQ05932 587 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PTPRNQ16849 979 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PIGZQ86VD9 579 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 DDX3XO00571 662 aaKnown RBP eCLIP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 NEPROQ6NW34 567 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 ISLR2Q6UXK2 745 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 UBE2R2Q712K3 238 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-208ENST00000397030 POU5F2Q8N7G0 328 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 OGDHLQ9ULD0 1010 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
MCF2L-208ENST00000397030 PEX10O60683 326 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 AOC2O75106 756 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 RPL21P46778 160 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 IDH2P48735 452 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 PGDP52209 483 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 GPM6BQ13491 265 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 PARP6Q2NL67 630 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 BHLHB9Q6PI77 547 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 TRPV3Q8NET8 790 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 NLGN2Q8NFZ4 835 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 VANGL1Q8TAA9 524 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 TP53INP1Q96A56 240 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 LINGO1Q96FE5 620 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 NARS2Q96I59 477 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 KLHL4Q9C0H6 718 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 EVLQ9UI08 416 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 IQCF5A8MTL0 148 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 BIRC5O15392 142 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 LTA4HP09960 611 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 SPIBQ01892 262 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 OC90Q02509 493 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 TAF10Q12962 218 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF276Q8N554 614 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 KAT5Q92993 513 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 ACO2Q99798 780 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 PABPC3Q9H361 631 aaKnown RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 SNPHO15079 494 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 IL12BP29460 328 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 GFOD2Q3B7J2 385 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 C2orf27AQ580R0 203 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 RFWD3Q6PCD5 774 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 NANOGNBQ7Z5D8 188 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 SCLYQ96I15 445 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 VPS35Q96QK1 796 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 CLEC4MQ9H2X3 399 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-208ENST00000397030 KCNF1Q9H3M0 494 aa17.52■□□□□ 0.4
MCF2L-208ENST00000397030 B4DGG1 531 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 FCHO1O14526 889 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 RPL17P18621 184 aaKnown RBP17.52■□□□□ 0.39
MCF2L-208ENST00000397030 CPSF6Q16630 551 aaKnown RBP eCLIP17.52■□□□□ 0.39
MCF2L-208ENST00000397030 STAG3L4Q8TBR4 150 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 BDH2Q9BUT1 245 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 ZSCAN5DPP0CG00 497 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 OMPP47874 163 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 MANFP55145 182 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms