RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 CXorf40AQ8TE69 158 aa19.03■□□□□ 0.64
MCF2L-207ENST00000397024 PCDH12Q9NPG4 1184 aa19.03■□□□□ 0.64
MCF2L-207ENST00000397024 CLCA2Q9UQC9 943 aa19.03■□□□□ 0.64
MCF2L-207ENST00000397024 ATRXP46100 2492 aa19.03■□□□□ 0.64
MCF2L-207ENST00000397024 TSPAN11A1L157 253 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 EIF3CLB5ME19 914 aaKnown RBP19.02■□□□□ 0.64
MCF2L-207ENST00000397024 AQP9O43315 295 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 OPA1O60313 960 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 MT-CO3P00414 261 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 ALPPL2P10696 532 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 PBX1P40424 430 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 DPYSQ14117 519 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 RTP5Q14D33 572 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 UGP2Q16851 508 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 DEFB133Q30KQ1 61 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 HS1BP3Q53T59 392 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 NYAP1Q6ZVC0 841 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 SRLQ86TD4 932 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 LUZP1Q86V48 1076 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 HCAR2Q8TDS4 363 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 LMX1AQ8TE12 382 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 NXPE2Q96DL1 559 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 EIF3CQ99613 913 aaKnown RBP19.02■□□□□ 0.64
MCF2L-207ENST00000397024 NCAPGQ9BPX3 1015 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 NRSN2Q9GZP1 204 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 DONSONQ9NYP3 566 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 AK5Q9Y6K8 562 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 CSNK1G3Q9Y6M4 447 aa19.02■□□□□ 0.64
MCF2L-207ENST00000397024 SYCE3A1L190 88 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 DFFAO00273 331 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 RIOK3O14730 519 aaKnown RBP19.01■□□□□ 0.63
MCF2L-207ENST00000397024 MUSKO15146 869 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 TLX3O43711 291 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-207ENST00000397024 PALMO75781 387 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 EIF4A3P38919 411 aaKnown RBP19.01■□□□□ 0.63
MCF2L-207ENST00000397024 HCAR3P49019 387 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 THOP1P52888 689 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 FANCCQ00597 558 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 C1orf61Q13536 156 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 IRF4Q15306 451 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 WSCD2Q2TBF2 565 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 FIGNQ5HY92 759 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 CDCP2Q5VXM1 449 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 PDZD3Q86UT5 571 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 CRELD1Q96HD1 420 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 ZNF641Q96N77 438 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-207ENST00000397024 DUSP23Q9BVJ7 150 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 SCUBE2Q9NQ36 999 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 ETNK2Q9NVF9 386 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 PCDHB1Q9Y5F3 818 aa19.01■□□□□ 0.63
MCF2L-207ENST00000397024 A0A087WV48 116 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 TTC24A2A3L6 582 aaPredicted RBP19■□□□□ 0.63
MCF2L-207ENST00000397024 XPAP23025 273 aaPredicted RBP19■□□□□ 0.63
MCF2L-207ENST00000397024 CSNK1DP48730 415 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 LIG3P49916 1009 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 SUOXP51687 545 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 YPEL5P62699 121 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 TXNRD3NBQ6F5E7 133 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 PSTKQ8IV42 348 aaKnown RBP19■□□□□ 0.63
MCF2L-207ENST00000397024 CLPBQ9H078 707 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 SCINQ9Y6U3 715 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 RP1P56715 2156 aa19■□□□□ 0.63
MCF2L-207ENST00000397024 SMG1Q96Q15 3661 aaKnown RBP19■□□□□ 0.63
MCF2L-207ENST00000397024 H3BM21 787 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 CASC3O15234 703 aaKnown RBP18.99■□□□□ 0.63
MCF2L-207ENST00000397024 CELA2BP08218 269 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-207ENST00000397024 MYBL1P10243 752 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 C6P13671 934 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 AMPD1P23109 780 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 PCK1P35558 622 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
MCF2L-207ENST00000397024 ELP6Q0PNE2 266 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 PTK2BQ14289 1009 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 GRM3Q14832 879 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 LRRC14Q15048 493 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 CDKN3Q16667 212 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 SMTNL2Q2TAL5 461 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 PRRT3Q5FWE3 981 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 ZCCHC8Q6NZY4 707 aaKnown RBP18.99■□□□□ 0.63
MCF2L-207ENST00000397024 GUSBP11Q6P575 273 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 BRAT1Q6PJG6 821 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 PHACTR4Q8IZ21 702 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 IFI44Q8TCB0 444 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 CPLX3Q8WVH0 158 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 BTBD6Q96KE9 485 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 DCBLD2Q96PD2 775 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 TUBGCP5Q96RT8 1024 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 LRRC61Q9BV99 259 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 C1QTNF7Q9BXJ2 289 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 MRPL47Q9HD33 250 aaKnown RBP18.99■□□□□ 0.63
MCF2L-207ENST00000397024 APOBEC3BQ9UH17 382 aaKnown RBP18.99■□□□□ 0.63
MCF2L-207ENST00000397024 ANKRD36A6QL64 1941 aa18.99■□□□□ 0.63
MCF2L-207ENST00000397024 A0A1W2PQJ5 194 aa18.98■□□□□ 0.63
MCF2L-207ENST00000397024 CPED1A4D0V7 1026 aa18.98■□□□□ 0.63
MCF2L-207ENST00000397024 GP1BAP07359 652 aa18.98■□□□□ 0.63
MCF2L-207ENST00000397024 ITPKBP27987 946 aa18.98■□□□□ 0.63
MCF2L-207ENST00000397024 MMP12P39900 470 aa18.98■□□□□ 0.63
MCF2L-207ENST00000397024 DUSP3P51452 185 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-207ENST00000397024 IL10RBQ08334 325 aa18.98■□□□□ 0.63
MCF2L-207ENST00000397024 NSUN2Q08J23 767 aaKnown RBP eCLIP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms