RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 RLN3Q8WXF3 142 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 TOE1Q96GM8 510 aaKnown RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 RUNDC3BQ96NL0 473 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 RBM15Q96T37 977 aaKnown RBP eCLIP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 TUBB2BQ9BVA1 445 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 FAM153AQ9UHL3 310 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 CDC23Q9UJX2 597 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 TPX2Q9ULW0 747 aaKnown RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 RPL26L1Q9UNX3 145 aaKnown RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 HCN4Q9Y3Q4 1203 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ARIH1Q9Y4X5 557 aaPredicted RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 PCDHGC4Q9Y5F7 938 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 GOLGA6CA6NDK9 693 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 GOLGA6BA6NDN3 693 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 C10orf142B7Z368 130 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 H0Y858 1186 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 SEMA4FO95754 770 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 GOLGA6DP0CG33 693 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PSMB4P28070 264 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 ABL2P42684 1182 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 GEMP55040 296 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 ELP6Q0PNE2 266 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PRPSAP1Q14558 356 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 UGP2Q16851 508 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PARP6Q2NL67 630 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 SPDYCQ5MJ68 293 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 NEK5Q6P3R8 708 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 TTC27Q6P3X3 843 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 CCDC137Q6PK04 289 aaKnown RBP16.55■□□□□ 0.24
AP1S3-202ENST00000396653 ZSWIM9Q86XI8 627 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 OR2T34Q8NGX1 318 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PCDH9Q9HC56 1237 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PREBQ9HCU5 417 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 GOLGA6AQ9NYA3 693 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PAK5Q9P286 719 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 MBD1Q9UIS9 605 aaPredicted RBP16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PHTF1Q9UMS5 762 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 AAR2Q9Y312 384 aaKnown RBP16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PPIL1Q9Y3C6 166 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 PCDHB9Q9Y5E1 797 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 LRRK1Q38SD2 2015 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 CACNA1HO95180 2353 aa16.55■□□□□ 0.24
AP1S3-202ENST00000396653 TRPM6Q9BX84 2022 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 LRRC72A6NJI9 287 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 PDE2AO00408 941 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 PLK4O00444 970 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 AREL1O15033 823 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 HRO43593 1189 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 MT-CYBP00156 380 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 IFNB1P01574 187 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 EPOP01588 193 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 TIMP2P16035 220 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 BCKDHBP21953 392 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 XPAP23025 273 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 ACSL1P33121 698 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 FDFT1P37268 417 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 KCNJ1P48048 391 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 TAS2R38P59533 333 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 CKAP4Q07065 602 aaKnown RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 KDELC1Q6UW63 502 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 GSTA5Q7RTV2 222 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 ZNF572Q7Z3I7 529 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 FAM124AQ86V42 546 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 NDUFAF2Q8N183 169 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 FAM160A2Q8N612 972 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 PAF1Q8N7H5 531 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 CADM4Q8NFZ8 388 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 OR14C36Q8NHC7 312 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 SPATA22Q8NHS9 363 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 SLCO2A1Q92959 643 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 OXNAD1Q96HP4 312 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 FEM1CQ96JP0 617 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 ZC3H10Q96K80 434 aaKnown RBP16.54■□□□□ 0.24
AP1S3-202ENST00000396653 TRIB3Q96RU7 358 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 GORASP1Q9BQQ3 440 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 ABCA7Q8IZY2 2146 aa16.54■□□□□ 0.24
AP1S3-202ENST00000396653 PSMD3O43242 534 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 TSPAN6O43657 245 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 ZNF500O60304 480 aaPredicted RBP16.53■□□□□ 0.24
AP1S3-202ENST00000396653 NDUFS2O75306 463 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 URI1O94763 535 aaPredicted RBP16.53■□□□□ 0.24
AP1S3-202ENST00000396653 PRLP01236 227 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 GRIA4P48058 902 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 RPL6Q02878 288 aaKnown RBP16.53■□□□□ 0.24
AP1S3-202ENST00000396653 CDK18Q07002 472 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 WHAMMP3Q1A5X7 153 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 FAM182AQ5T1J6 154 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 PMS2CLQ68D20 193 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 ERAP2Q6P179 960 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 TTC7BQ86TV6 843 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 TRIM69Q86WT6 500 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 FRMD1Q8N878 549 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 PDCD6IPQ8WUM4 868 aaKnown RBP16.53■□□□□ 0.24
AP1S3-202ENST00000396653 PIH1D2Q8WWB5 315 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 ZNF592Q92610 1267 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 LRRC45Q96CN5 670 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms