RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CHD5Q8TDI0 1954 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 MROH6A6NGR9 719 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 NBNO60934 754 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 RTN3O95197 1032 aaPredicted RBP16.69■□□□□ 0.26
TRIM39-205ENST00000396551 SLC11A1P49279 550 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 SERINC3Q13530 473 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 ANO7Q6IWH7 933 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 KBTBD2Q8IY47 623 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 MRPL57Q9BQC6 102 aaKnown RBP16.69■□□□□ 0.26
TRIM39-205ENST00000396551 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRIM39-205ENST00000396551 GPAMQ9HCL2 828 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 TET1Q8NFU7 2136 aa16.69■□□□□ 0.26
TRIM39-205ENST00000396551 ENPP3O14638 875 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 PAPSS2O95340 614 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 EPHB1P54762 984 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 IL10RBQ08334 325 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 CSHL1Q14406 222 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 POLD3Q15054 466 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 TECRLQ5HYJ1 363 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 RTP2Q5QGT7 225 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 LHX8Q68G74 356 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 LRRC8DQ7L1W4 858 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 PTAR1Q7Z6K3 402 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 LDB1Q86U70 411 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 DEFB107AQ8IZN7 70 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 EFCAB3Q8N7B9 438 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 CCNYL1Q8N7R7 359 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 ZNF385DQ9H6B1 395 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 BATF3Q9NR55 127 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 PPM1HQ9ULR3 514 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 SSX2IPQ9Y2D8 614 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 EIF4E1BA6NMX2 242 aaKnown RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 TMEM233B4DJY2 109 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 NT5C1B-RDH14C9J2C7 533 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 MUSKO15146 869 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 TBC1D4O60343 1298 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 RAMP2O60895 175 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 SERPINB5P36952 375 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 PBX3P40426 434 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 HK2P52789 917 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 KDM1BQ8NB78 822 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 STARD7Q9NQZ5 370 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 G3BP2Q9UN86 482 aaKnown RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 LOC285095A0A1B0GVY8 99 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 OR51F1A6NGY5 319 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 KCNA5P22460 613 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 PIK3R1P27986 724 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 SLC12A2P55011 1212 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 GPR17Q13304 367 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 BLMHQ13867 455 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 TCTN1Q2MV58 587 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 TMCO4Q5TGY1 634 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 ARMC3Q5W041 872 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 TMEM173Q86WV6 379 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 CILP2Q8IUL8 1156 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 DBF4BQ8NFT6 615 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 CALML6Q8TD86 181 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 PDCD6IPQ8WUM4 868 aaKnown RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 RTKNQ9BST9 563 aa16.68■□□□□ 0.26
TRIM39-205ENST00000396551 MARCH4Q9P2E8 410 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 MTF2Q9Y483 593 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-205ENST00000396551 CLCN5P51795 746 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 LBRQ14739 615 aaKnown RBP16.67■□□□□ 0.26
TRIM39-205ENST00000396551 PPM1LQ5SGD2 360 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 TMEM198Q66K66 360 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 FUT10Q6P4F1 479 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 TAS1R1Q7RTX1 841 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 ABI1Q8IZP0 508 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 SH3RF2Q8TEC5 729 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 GIPC2Q8TF65 315 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 HDAC10Q969S8 669 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 CNDP1Q96KN2 507 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 SPATA17Q96L03 361 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 DONSONQ9NYP3 566 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 ANGPTL2Q9UKU9 493 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 LDB2O43679 373 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 NPHS1O60500 1241 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 LUC7L3O95232 432 aaKnown RBP16.67■□□□□ 0.26
TRIM39-205ENST00000396551 ZDHHC11BP0C7U3 371 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 COL6A1P12109 1028 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 KCNQ1P51787 676 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 DUSP4Q13115 394 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 CCNIQ14094 377 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 SLC14A2Q15849 920 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 SPPL2BQ8TCT7 592 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 ANKRD49Q8WVL7 239 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 TSEN34Q9BSV6 310 aaKnown RBP16.67■□□□□ 0.26
TRIM39-205ENST00000396551 VTI1BQ9UEU0 232 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 ARHGAP26Q9UNA1 814 aa16.67■□□□□ 0.26
TRIM39-205ENST00000396551 OR1E1P30953 314 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PFKPQ01813 784 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 RING1Q06587 406 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PDCD2Q16342 344 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PARP15Q460N3 678 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 HECTD2Q5U5R9 776 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 RNF135Q8IUD6 432 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 FAM136AQ96C01 138 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms