RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZNF829Q3KNS6 432 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 VPS26BQ4G0F5 336 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 TMEM53Q6P2H8 277 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CYS1Q717R9 158 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 OTOP3Q7RTS5 596 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PSTKQ8IV42 348 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 TXNDC5Q8NBS9 432 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SEPT1Q8WYJ6 367 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 COPS5Q92905 334 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 C12orf42Q96LP6 360 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 HEPHQ9BQS7 1158 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 VTI1BQ9UEU0 232 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 DSEQ9UL01 958 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 AKT3Q9Y243 479 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FADS3Q9Y5Q0 445 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PTGDR2Q9Y5Y4 395 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CASP8AP2Q9UKL3 1982 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 A0A0G2JLL6 359 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 EEF2KO00418 725 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 NRP2O60462 931 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 BMP10O95393 424 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 IL10P22301 178 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 YBX1P67809 324 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PLIN5Q00G26 463 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PFKPQ01813 784 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PIGFQ07326 219 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 MXD4Q14582 209 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 HABP4Q5JVS0 413 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PRRT2Q7Z6L0 340 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CPSF7Q8N684 471 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SPATA22Q8NHS9 363 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 HM13Q8TCT9 377 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 ANKRD60Q9BZ19 345 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 DAPK2Q9UIK4 370 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 MID2Q9UJV3 735 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 ZNF214Q9UL59 606 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 DHRS12A0PJE2 317 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 ZBBXA8MT70 800 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FAM72CH0Y354 149 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FARP2O94887 1054 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 BCL10O95999 233 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SLC35E2BP0CK96 405 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 HSPA1AP0DMV8 641 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 HSPA1BP0DMV9 641 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 KCNA5P22460 613 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 EEF1DP29692 281 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 RBP5P82980 135 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 GRM1Q13255 1194 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 RPS6KA2Q15349 733 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 TARBP2Q15633 366 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FAM83EQ2M2I3 478 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 PDCD4Q53EL6 469 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FBXO48Q5FWF7 155 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FAM72AQ5TYM5 149 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FAM72DQ6L9T8 149 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CTU1Q7Z7A3 348 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FAM72BQ86X60 149 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CAMK1DQ8IU85 385 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 DNAJB14Q8TBM8 379 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SPPL2BQ8TCT7 592 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 TEX13BQ9BXU2 312 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 DGCR6LQ9BY27 220 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 MRPL46Q9H2W6 279 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 FANCEQ9HB96 536 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 GID8Q9NWU2 228 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 NCKIPSDQ9NZQ3 722 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SUCOQ9UBS9 1254 aaKnown RBP9.91□□□□□ -0.82
TRIM39-203ENST00000396547 VPS28Q9UK41 221 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 ADAM28Q9UKQ2 775 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 WDR37Q9Y2I8 494 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 TRPC5OSA6NMA1 111 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 A8MU76 341 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 KDM1AO60341 852 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 SUPT7LO94864 414 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 IL18RAPO95256 599 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 SNAP29O95721 258 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 PGK1P00558 417 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 STMN1P16949 149 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 MATN1P21941 496 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 ELK4P28324 431 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 OXTRP30559 389 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 NDUFV1P49821 464 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 NSUN2Q08J23 767 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 SLC12A1Q13621 1099 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 CYP51A1Q16850 503 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 RGS21Q2M5E4 152 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 SAMD4BQ5PRF9 694 aaKnown RBP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 C6orf183Q5T699 404 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 MAMDC4Q6UXC1 1216 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 PIWIL3Q7Z3Z3 882 aaKnown RBP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 CLEC14AQ86T13 490 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 IPMKQ8NFU5 416 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 OR2T34Q8NGX1 318 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 OR2T3Q8NH03 318 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 HMGCLL1Q8TB92 370 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 HEXDCQ8WVB3 486 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms