RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PTPN9P43378 593 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 NOMO3P69849 1222 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 NFATC4Q14934 902 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 TRNP1Q6NT89 227 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 PCDH19Q8TAB3 1148 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 NTAN1Q96AB6 310 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 CCDC74AQ96AQ1 378 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 VOPP1Q96AW1 172 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 ARHGAP9Q9BRR9 750 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 MBNL1Q9NR56 388 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 AJAP1Q9UKB5 411 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 PCDHB11Q9Y5F2 797 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 DGKBQ9Y6T7 804 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 RP1P56715 2156 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 PNMA6AP0CW24 399 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 UCHL3P15374 230 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 GLB1P16278 677 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 MMP8P22894 467 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 RHOAP61586 193 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 IRF4Q15306 451 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 PARP15Q460N3 678 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 KLHDC7AQ5VTJ3 777 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 ERAP2Q6P179 960 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 PRICKLE2Q7Z3G6 844 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 JAMLQ86YT9 394 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 CPA5Q8WXQ8 436 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 CENPIQ92674 756 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 ZNF641Q96N77 438 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 RBM15Q96T37 977 aaKnown RBP eCLIP17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 CMKLR1Q99788 373 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 TUBGCP2Q9BSJ2 902 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 APOOQ9BUR5 198 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 NAA15Q9BXJ9 866 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 LRRN3Q9H3W5 708 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 STARD5Q9NSY2 213 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 NDFIP2Q9NV92 336 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 PNMA8BQ9ULN7 279 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 ACTL7AQ9Y615 435 aa17.68■□□□□ 0.42
EXOSC3-202ENST00000396521 ZW10O43264 779 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 EFSO43281 561 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 NOBOXO60393 691 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 TNFP01375 233 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 RPLP0P05388 317 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 KELP23276 732 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 SRP54P61011 504 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 CCL7P80098 99 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 MTM1Q13496 603 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 UGP2Q16851 508 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 ALG11Q2TAA5 492 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 WSCD2Q2TBF2 565 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 CCDC14Q49A88 953 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 ATXN7L2Q5T6C5 722 aaPredicted RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 TAF3Q5VWG9 929 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 NAA35Q5VZE5 725 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 DPY19L2P1Q6NXN4 242 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 BRAT1Q6PJG6 821 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 OGFOD3Q6PK18 319 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 ENPP7Q6UWV6 458 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 TRIM72Q6ZMU5 477 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 ATG14Q6ZNE5 492 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 NOP9Q86U38 636 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 ZNF354CQ86Y25 554 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 RTL3Q8N8U3 475 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 KYQ8NBH2 561 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 GPR156Q8NFN8 814 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 EPS8L1Q8TE68 723 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 RXFP2Q8WXD0 754 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 TSACCQ96A04 125 aaPredicted RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 WDR92Q96MX6 357 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 WRAP53Q9BUR4 548 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 METTL5Q9NRN9 209 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 KLQ9UEF7 1012 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 IL17BQ9UHF5 180 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 DOCK4Q8N1I0 1966 aa17.67■□□□□ 0.42
EXOSC3-202ENST00000396521 A0A1W2PQC6 194 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 TSPAN11A1L157 253 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 PMS2P1A4D2B8 440 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 C2CD4BA6NLJ0 364 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 HOXC4P09017 264 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 AIF1P55008 147 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 ZFP36L1Q07352 338 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 NFATC3Q12968 1075 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 INPP5AQ14642 412 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 CLPPQ16740 277 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 CDO1Q16878 200 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 C2CD6Q53TS8 623 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 CFAP58Q5T655 872 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 TMEM164Q5U3C3 297 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 B3GNT8Q7Z7M8 397 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 DNAAF5Q86Y56 855 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 CCNJLQ8IV13 435 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 EMC1Q8N766 993 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 EXD3Q8N9H8 876 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 HMCESQ96FZ2 354 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 TUBGCP5Q96RT8 1024 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms