RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HOXA9P31269 272 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PGM1P36871 562 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GALNT1Q10472 559 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MMRN1Q13201 1228 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ELAVL3Q14576 367 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LRRC14Q15048 493 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CHI3L2Q15782 390 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ATP13A4Q4VNC1 1196 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ABCA7Q8IZY2 2146 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF641Q96N77 438 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RAD9AQ99638 391 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MUC13Q9H3R2 512 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ELOVL6Q9H5J4 265 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 EIF3LQ9Y262 564 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 INSIG1O15503 277 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DNAJC8O75937 253 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LTA4HP09960 611 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FAM153BP0C7A2 387 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PRKCHP24723 683 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SSTR3P32745 418 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 IFI35P80217 286 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GRIK2Q13002 908 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DPY19L1Q2PZI1 675 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FAM153CQ494X1 144 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FAM171BQ6P995 826 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GLB1L3Q8NCI6 653 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 JOSD2Q8TAC2 188 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CDCA3Q99618 268 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ARNT2Q9HBZ2 717 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SAE1Q9UBE0 346 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CORO2BQ9UQ03 480 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 USP3Q9Y6I4 520 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ARHGAP10A1A4S6 786 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ADAMTS4O75173 837 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PTPN2P17706 415 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GRIA4P48058 902 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 HNMTP50135 292 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SEC24CP53992 1094 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RIPK1Q13546 671 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 UNC5AQ6ZN44 842 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 AGMOQ6ZNB7 445 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TFAP2DQ7Z6R9 452 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ICA1LQ8NDH6 482 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FGD4Q96M96 766 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MYCBPQ99417 103 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RNF112Q9ULX5 631 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PSMA4P25789 261 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CCNG1P51959 295 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 NAGLUP54802 743 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CST9Q5W186 159 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PCDH20Q8N6Y1 951 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GFM2Q969S9 779 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 IGSF21Q96ID5 467 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM45AQ9NWC5 275 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GPR179Q6PRD1 2367 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SCN8AQ9UQD0 1980 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GNGT2O14610 69 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 UBDO15205 165 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FSBPO95073 299 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CTNNB1P35222 781 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CCL14Q16627 93 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TUBGCP3Q96CW5 907 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CNDP1Q96KN2 507 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SLC2A13Q96QE2 648 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PTPN18Q99952 460 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ITM2CQ9NQX7 267 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MKS1Q9NXB0 559 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PRDM4Q9UKN5 801 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 OTCP00480 354 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ANXA5P08758 320 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GABRR2P28476 465 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LPIN1Q14693 890 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ALKAL1Q6UXT8 129 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MARK2Q7KZI7 788 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DNAJB7Q7Z6W7 309 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RP9Q8TA86 221 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SNX19Q92543 992 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LPPQ93052 612 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 OSBPL10Q9BXB5 764 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FBRSQ9HAH7 460 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GOLGA2P5Q9HBQ8 144 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ATAD3AQ9NVI7 634 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 E2F8A0AVK6 867 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ANKRD66B4E2M5 251 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 NVLO15381 856 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LZTS3O60299 673 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ULK1O75385 1050 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 C2P06681 752 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 C8AP07357 584 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CORO1AP31146 461 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RPL14P50914 215 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PKNOX1P55347 436 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MRPS35P82673 323 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 KLC1Q07866 573 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CYLC2Q14093 348 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GNA13Q14344 377 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DDR2Q16832 855 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RFTN2Q52LD8 501 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms