RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 WDR4P57081 412 aaKnown RBP19.48■□□□□ 0.71
LMNB1-202ENST00000395354 PACS1Q6VY07 963 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 CPLX4Q7Z7G2 160 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 RASSF3Q86WH2 238 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 PPHLN1Q8NEY8 458 aaKnown RBP19.48■□□□□ 0.71
LMNB1-202ENST00000395354 ARRDC2Q8TBH0 407 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 APOPT1Q96IL0 206 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 SERAC1Q96JX3 654 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 ACE2Q9BYF1 805 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-202ENST00000395354 NSRP1Q9H0G5 558 aaKnown RBP19.48■□□□□ 0.71
LMNB1-202ENST00000395354 TRPV5Q9NQA5 729 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 CHD5Q8TDI0 1954 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 A0A0D9SEW6 157 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 HOXC11O43248 304 aaPredicted RBP19.47■□□□□ 0.71
LMNB1-202ENST00000395354 NARSO43776 548 aaKnown RBP19.47■□□□□ 0.71
LMNB1-202ENST00000395354 UGT1A9O60656 530 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 MMP2P08253 660 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 TPH1P17752 444 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 GP5P40197 560 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 ITKQ08881 620 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF235Q14590 738 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 GRTP1Q5TC63 336 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 IL31Q6EBC2 164 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 TAX1BP1Q86VP1 789 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 SPATS2Q86XZ4 545 aaKnown RBP19.47■□□□□ 0.71
LMNB1-202ENST00000395354 CARNMT1Q8N4J0 409 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 ACMSDQ8TDX5 336 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 RANBP9Q96S59 729 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 UGT1A7Q9HAW7 530 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 UGT1A10Q9HAW8 530 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 UGT1A8Q9HAW9 530 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 CHRAC1Q9NRG0 131 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 NSMCE4AQ9NXX6 385 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 SEPT3Q9UH03 358 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 GGA2Q9UJY4 613 aa19.47■□□□□ 0.71
LMNB1-202ENST00000395354 LUC7L3O95232 432 aaKnown RBP19.46■□□□□ 0.71
LMNB1-202ENST00000395354 EPOP01588 193 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 SRFP11831 508 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 CES1P23141 567 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 ADRA1DP25100 572 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 CD86P42081 329 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 NEK3P51956 506 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 PFKPQ01813 784 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 DSC2Q02487 901 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 PDPK2PQ6A1A2 396 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 RGS9BPQ6ZS82 235 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 RNF135Q8IUD6 432 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.46■□□□□ 0.712e-6■□□□□ 9.4
LMNB1-202ENST00000395354 UNC5BQ8IZJ1 945 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 GJD3Q8N144 294 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 PGBD5Q8N414 524 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.46■□□□□ 0.71
LMNB1-202ENST00000395354 NAT16Q8N8M0 369 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 OR7D4Q8NG98 312 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 DNASE1L2Q92874 299 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 RABEP2Q9H5N1 569 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 TXNDC16Q9P2K2 825 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 UBA2Q9UBT2 640 aaPredicted RBP19.46■□□□□ 0.71
LMNB1-202ENST00000395354 CLEC4EQ9ULY5 219 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 TCAF1Q9Y4C2 921 aa19.46■□□□□ 0.71
LMNB1-202ENST00000395354 H0Y626 953 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 EBAG9O00559 213 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 RFPL1O75677 317 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 ERVK-10P10266 1014 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 PYGBP11216 843 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 GJA4P35212 333 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 CCT5P48643 541 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 SEPT7Q16181 437 aaKnown RBP19.45■□□□□ 0.7
LMNB1-202ENST00000395354 HHATQ5VTY9 493 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 RNF43Q68DV7 783 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 CXorf57Q6NSI4 855 aaKnown RBP19.45■□□□□ 0.7
LMNB1-202ENST00000395354 CES3Q6UWW8 571 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 MFN1Q8IWA4 741 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 OR52K2Q8NGK3 314 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 GDAP1Q8TB36 358 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 MFSD3Q96ES6 412 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 PSKH2Q96QS6 385 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 MGME1Q9BQP7 344 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 SLC2A4RGQ9NR83 387 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 SORCS3Q9UPU3 1222 aa19.45■□□□□ 0.7
LMNB1-202ENST00000395354 LOC285095A0A1B0GVY8 99 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 HMX2A2RU54 273 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 VIMP08670 466 aaKnown RBP19.44■□□□□ 0.7
LMNB1-202ENST00000395354 ALADP13716 330 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 MAXP61244 160 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 CDH18Q13634 790 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 SLC1A5Q15758 541 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 PDK4Q16654 411 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 GAB4Q2WGN9 574 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 TJAP1Q5JTD0 557 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 TEDDM1Q5T9Z0 273 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 GKAP1Q5VSY0 366 aaPredicted RBP19.44■□□□□ 0.7
LMNB1-202ENST00000395354 KCNMB4Q86W47 210 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 LRRC34Q8IZ02 419 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 FIBINQ8TAL6 211 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 TCP10LQ8TDR4 215 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 FEM1CQ96JP0 617 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 SPON2Q9BUD6 331 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 SLC2A11Q9BYW1 496 aa19.44■□□□□ 0.7
LMNB1-202ENST00000395354 MLXIPLQ9NP71 852 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms