RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TMEM191CA6NGB0 347 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 PTGES3LE9PB15 166 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 SELPP16109 830 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 TFEBP19484 476 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 MC4RP32245 332 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 AP5B1Q2VPB7 878 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 EML3Q32P44 896 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 OR6K2Q8NGY2 324 aa10.46□□□□□ -0.74
COL4A6-203ENST00000394872 H2AFXP16104 143 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 CBX2Q14781 532 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 MAT2BQ9NZL9 334 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 FARP2O94887 1054 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 CES1P23141 567 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ADRA1DP25100 572 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 RPL3P39023 403 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 MATKP42679 507 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 PKNOX1P55347 436 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 RAB10P61026 200 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ST3GAL1Q11201 340 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 PSRC1Q6PGN9 363 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ADHFE1Q8IWW8 467 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 FAM71AQ8IYT1 594 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 PRDM12Q9H4Q4 367 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 GULP1Q9UBP9 304 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 MKL2Q9ULH7 1088 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 SPATA2Q9UM82 520 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 BTRCQ9Y297 605 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 PCDHB9Q9Y5E1 797 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 AVILO75366 819 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 FGBP02675 491 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ITGAXP20702 1163 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 RPL4P36578 427 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ITGA1P56199 1179 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 RPL38P63173 70 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 SLC34A1Q06495 639 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF549Q6P9A3 640 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 RAVER1Q8IY67 606 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ADGRG2Q8IZP9 1017 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 PCDH20Q8N6Y1 951 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 LRRC52Q8N7C0 313 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 C12orf50Q8NA57 414 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 BHLHE22Q8NFJ8 381 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF671Q8TAW3 534 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 CENPIQ92674 756 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 PPP3R2Q96LZ3 170 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 MCM8Q9UJA3 840 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ANAPC2Q9UJX6 822 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 DERAQ9Y315 318 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 CCNDBP1O95273 360 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ATP13A4Q4VNC1 1196 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 APTXQ7Z2E3 356 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 MON1AQ86VX9 555 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 OR4L1Q8NH43 312 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 MYO19Q96H55 970 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 TEKT5Q96M29 485 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 CNGB3Q9NQW8 809 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF624Q9P2J8 865 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 VAV3Q9UKW4 847 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 CORO2BQ9UQ03 480 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ULK1O75385 1050 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 RECQL5O94762 991 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 TSPAN8P19075 237 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 ATP5F1P24539 256 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 GRIA4P48058 902 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 TBX2Q13207 712 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 SQLEQ14534 574 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 LRRC38Q5VT99 294 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 DHRSXQ8N5I4 330 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 HDAC7Q8WUI4 952 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 KLRG1Q96E93 195 aa10.45□□□□□ -0.74
COL4A6-203ENST00000394872 IMP3Q9NV31 184 aaKnown RBP10.45□□□□□ -0.74
COL4A6-203ENST00000394872 H3BQF6 201 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PAGE1O75459 146 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 FGFR3P22607 806 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 RPL22P35268 128 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PSMD8P48556 350 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 TUSC3Q13454 348 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SLC44A4Q53GD3 710 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 INO80DQ53TQ3 878 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PHF13Q86YI8 300 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 LNX1Q8TBB1 728 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 LINGO1Q96FE5 620 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MMADHCQ9H3L0 296 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ERAL1O75616 437 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MED26O95402 600 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PROCP04070 461 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 KELP23276 732 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SRSF11Q05519 484 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 KCNA10Q16322 511 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 TCEAL5Q5H9L2 206 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 EEF1DP3Q658K8 133 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 GPRIN3Q6ZVF9 776 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SH3BP5LQ7L8J4 393 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ARMC8Q8IUR7 673 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 C7orf61Q8IZ16 206 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms