RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 FASP25445 335 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 LSAMPQ13449 338 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 HSF5Q4G112 596 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 BTBD8Q5XKL5 378 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 TMEM214Q6NUQ4 689 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 PRR23BQ6ZRT6 265 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 RP9Q8TA86 221 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 NAT9Q9BTE0 207 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 ROGDIQ9GZN7 287 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 ALG2Q9H553 416 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 WDR70Q9NW82 654 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 DDX43Q9NXZ2 648 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 KIAA1257Q9ULG3 409 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FAM72CH0Y354 149 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 SNX2O60749 519 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 B3GAT3O94766 335 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 DHRS4L1P0CG22 281 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 ECT2LQ008S8 904 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FAM72AQ5TYM5 149 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FAM72DQ6L9T8 149 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FAM72BQ86X60 149 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 SLC35F5Q8WV83 523 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FBXL20Q96IG2 436 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF560Q96MR9 790 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 MRPS26Q9BYN8 205 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 PPME1Q9Y570 386 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 BCLAF3A2AJT9 711 aaKnown RBP13.31□□□□□ -0.28
NFKB1-202ENST00000394820 MOXD2PA6NHM9 499 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 M0R3G1 203 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 GABBR2O75899 941 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 PGK1P00558 417 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 GRIK1P39086 918 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 CD151P48509 253 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SNX17Q15036 470 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 MAPRE2Q15555 327 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 NEPROQ6NW34 567 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 TMEM26Q6ZUK4 368 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 ANKRD52Q8NB46 1076 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 GPR152Q8TDT2 470 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 GLMNQ92990 594 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SNX27Q96L92 541 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SLC29A1Q99808 456 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 PNMA8BQ9ULN7 279 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-202ENST00000394820 DMTF1Q9Y222 760 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 EFR3BQ9Y2G0 817 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 A8MX80 341 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 TRIM38O00635 465 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SH3BP5O60239 455 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 DARSP14868 501 aaKnown RBP13.31□□□□□ -0.28
NFKB1-202ENST00000394820 PRKCHP24723 683 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 HUNKP57058 714 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 HPCAP84074 193 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 PIGFQ07326 219 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 CDH17Q12864 832 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 CBX3Q13185 183 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 NR1D2Q14995 579 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 TIGD2Q4W5G0 525 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SETD3Q86TU7 594 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-202ENST00000394820 DHRSXQ8N5I4 330 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 B3GALNT2Q8NCR0 500 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 MZB1Q8WU39 189 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 RBBP8Q99708 897 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 EGFL8Q99944 293 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 EML4Q9HC35 981 aaKnown RBP13.31□□□□□ -0.28
NFKB1-202ENST00000394820 ZFYVE28Q9HCC9 887 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SORCS3Q9UPU3 1222 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 KANSL1LA0AUZ9 987 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 TFAP2AP05549 437 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SNRPB2P08579 225 aaKnown RBP13.31□□□□□ -0.28
NFKB1-202ENST00000394820 HGFP14210 728 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 BDNFP23560 247 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 INHBEP58166 350 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 UGP2Q16851 508 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 SPANXN3Q5MJ09 141 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 NCBP2-AS2Q69YL0 99 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 OSTM1Q86WC4 334 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 EBF1Q9UH73 591 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 EMCNQ9ULC0 261 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 IPPQ9Y573 584 aa13.31□□□□□ -0.28
NFKB1-202ENST00000394820 HMX2A2RU54 273 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 GUCA1CO95843 209 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 BCL10O95999 233 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PRKCGP05129 697 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 KCNK10P57789 538 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PTPRCAPQ14761 206 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 GPR158Q5T848 1215 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 CNSTQ6PJW8 725 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 RNF111Q6ZNA4 994 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms