RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CCDC78A2IDD5 438 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 TRAFD1O14545 582 aaPredicted RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 CACNG3O60359 315 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UGT1A9O60656 530 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 GPR37L1O60883 481 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 TBL1XO60907 577 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 SPAG6O75602 509 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UBOX5O94941 541 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UNC5CO95185 931 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 OLFM2O95897 454 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 C1QAP02745 245 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 TSHRP16473 764 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 KRT15P19012 456 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 CALB2P22676 271 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 GLDCP23378 1020 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 CHRNA4P43681 627 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 MAPKAPK2P49137 400 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 CDH4P55283 916 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 YBEYP58557 167 aaPredicted RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 NTHL1P78549 312 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 DSC2Q02487 901 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 GNA12Q03113 381 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UBE3AQ05086 875 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 ZNF177Q13360 481 aaPredicted RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 DYNC1I2Q13409 638 aaKnown RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 HNRNPDQ14103 355 aaKnown RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 PCSK7Q16549 785 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 KLHL38Q2WGJ6 581 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 C5orf22Q49AR2 442 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 WASHC2DQ5SRD0 308 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 TDRPQ86YL5 185 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.02□□□□□ -1.286e-7■■■■■ 139.2
RTN4-205ENST00000394609 PGBD3Q8N328 593 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 PGBD5Q8N414 524 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 PPM1NQ8N819 430 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 GSDMBQ8TAX9 411 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 AZIN2Q96A70 460 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 GCNAQ96QF7 691 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 FCRL5Q96RD9 977 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 TSC22D3Q99576 134 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 FICDQ9BVA6 458 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 LRMDAQ9H2I8 198 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 LRRC40Q9H9A6 602 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UGT1A7Q9HAW7 530 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UGT1A10Q9HAW8 530 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 UGT1A8Q9HAW9 530 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 MLXIPLQ9NP71 852 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 KCNK9Q9NPC2 374 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 CASS4Q9NQ75 786 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 SMYD2Q9NRG4 433 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 PAPOLBQ9NRJ5 636 aaKnown RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 BFARQ9NZS9 450 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 SLC17A6Q9P2U8 582 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 CCL26Q9Y258 94 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 YBX2Q9Y2T7 364 aaKnown RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 AAR2Q9Y312 384 aaKnown RBP7.02□□□□□ -1.28
RTN4-205ENST00000394609 RWDD3Q9Y3V2 267 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 PCDHA11Q9Y5I1 949 aa7.02□□□□□ -1.28
RTN4-205ENST00000394609 ALPK3Q96L96 1907 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 TRAV19A0A0A6YYK7 116 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 ERI2A8K979 691 aaKnown RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 C5orf67F2Z3F1 127 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 H0Y626 953 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 CBX4O00257 560 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 MUSKO15146 869 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 PRAMEF11O60813 436 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 ADAM23O75077 832 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 SPAG7O75391 227 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 CLDN11O75508 207 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 ANXA9O76027 345 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 C1RP00736 705 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 RB1P06400 928 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 RHOP08100 348 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 RHOCP08134 193 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 INHBAP08476 426 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 LINGO3P0C6S8 592 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 BRAFP15056 766 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 PGAM1P18669 254 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 CDC25CP30307 473 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 STX2P32856 288 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 CD86P42081 329 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 RASSF2P50749 326 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 SLC18A1P54219 525 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 IL10RBQ08334 325 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 NIPAL4Q0D2K0 466 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 GPM6BQ13491 265 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 MPP2Q14168 576 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 IHHQ14623 411 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 TAF11Q15544 211 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 TEAD2Q15562 447 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 TSNAXIP1Q2TAA8 658 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 FSCBQ5H9T9 825 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 GPR158Q5T848 1215 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 RNF219Q5W0B1 726 aaPredicted RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 TPGS1Q6ZTW0 290 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 SPATA21Q7Z572 469 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 ADGRD2Q7Z7M1 963 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 BBS7Q8IWZ6 715 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 C4orf33Q8N1A6 199 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms