RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 OR52B2Q96RD2 323 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 KATNAL1Q9BW62 490 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 GATA5Q9BWX5 397 aaPredicted RBP15.68■□□□□ 0.1
PTBP1-204ENST00000394601 ADA2Q9NZK5 511 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 VPS51Q9UID3 782 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 PLXNA3P51805 1871 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 MTSS1O43312 755 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 F9P00740 461 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 AHSGP02765 367 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 CHRNGP07510 517 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 THRAP10827 490 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 ITGADQ13349 1161 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 LAYNQ6UX15 382 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 PDZD4Q76G19 769 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 LSMEM2Q8N112 164 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 DNAAF3Q8N9W5 541 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 BHLHE22Q8NFJ8 381 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 NMRAL1Q9HBL8 299 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 C20orf96Q9NUD7 363 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 DYTNA2CJ06 578 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 TMEM114B3SHH9 223 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 TK2O00142 265 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 PSMC3P17980 439 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 CDH2P19022 906 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 NSUN2Q08J23 767 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 PERM1Q5SV97 790 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 TSTD2Q5T7W7 516 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 ZNF786Q8N393 782 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 IL12RB2Q99665 862 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 TMEM79Q9BSE2 394 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 CHST12Q9NRB3 414 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 NDUFA13Q9P0J0 144 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 TRPV2Q9Y5S1 764 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 F8W810 466 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 TNFRSF10BO14763 440 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 ZBTB11O95625 1053 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 CLIC3O95833 236 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 BDNFP23560 247 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 ZNF135P52742 658 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-204ENST00000394601 ARL13BQ3SXY8 428 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 BEND5Q7L4P6 421 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 SNX29P2Q8IUI4 249 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 ACBD6Q9BR61 282 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 SACM1LQ9NTJ5 587 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 CDC14AQ9UNH5 594 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 GIT1Q9Y2X7 761 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 SNX13Q9Y5W8 968 aa15.67■□□□□ 0.1
PTBP1-204ENST00000394601 M0QZQ0 153 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 PDLIM1O00151 329 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 AGRPO00253 132 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 MATN2O00339 956 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 E2F6O75461 281 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 ITGB1P05556 798 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 PHEXP78562 749 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 CDH17Q12864 832 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 CST9Q5W186 159 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 POTEHQ6S545 545 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 C17orf99Q6UX52 265 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 SPNS2Q8IVW8 549 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 CEP97Q8IW35 865 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 WDR55Q9H6Y2 383 aaPredicted RBP15.66■□□□□ 0.1
PTBP1-204ENST00000394601 COQ6Q9Y2Z9 468 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 C1orf232A0A0U1RR37 186 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 CCDC78A2IDD5 438 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 GRID2O43424 1007 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 RPL9P32969 192 aaKnown RBP15.66■□□□□ 0.1
PTBP1-204ENST00000394601 ADGRG6Q86SQ4 1221 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 APBA2Q99767 749 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 TXNDC16Q9P2K2 825 aa15.66■□□□□ 0.1
PTBP1-204ENST00000394601 ARHGEF37A1IGU5 675 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 TMEM221A6NGB7 291 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 A6NL46 340 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 K7EPI3 171 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 CASQ2O14958 399 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-204ENST00000394601 TIMM44O43615 452 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 PEX11BO96011 259 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 JUNP05412 331 aaKnown RBP15.65■□□□□ 0.1
PTBP1-204ENST00000394601 CCNCP24863 283 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 BRCC3P46736 316 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 GNA12Q03113 381 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 BNIP3Q12983 259 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 IHHQ14623 411 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 GPR107Q5VW38 600 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 ZYG11AQ6WRX3 759 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 SERINC5Q86VE9 423 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 FTHL17Q9BXU8 183 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 NUF2Q9BZD4 464 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 DRC3Q9H069 523 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 TBC1D23Q9NUY8 699 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 IRAK2O43187 625 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 TRIM13O60858 407 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 PGK1P00558 417 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 XRCC1P18887 633 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-204ENST00000394601 SCD5Q86SK9 330 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 DENND6AQ8IWF6 608 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 CNDP1Q96KN2 507 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 FCRL5Q96RD9 977 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms