RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 C18orf25Q96B23 403 aaPredicted RBP16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 YIPF2Q9BWQ6 316 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 SPON1Q9HCB6 807 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 CDH7Q9ULB5 785 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 CORINQ9Y5Q5 1042 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 V9GYQ6 96 aa16.54■□□□□ 0.24
EFEMP1-202ENST00000394555 ANKRD12Q6UB98 2062 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 EI24O14681 340 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 ZNF12P17014 697 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 IL10P22301 178 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 OXTRP30559 389 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 NPY2RP49146 381 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 BCAT1P54687 386 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 CD300CQ08708 224 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM83EQ2M2I3 478 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 ZNF618Q5T7W0 954 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM35AQ86V20 835 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 SLC15A4Q8N697 577 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 NPWQ8N729 165 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 SPATA22Q8NHS9 363 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 MAGEE2Q8TD90 523 aaPredicted RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 AFG1LQ8WV93 481 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 PIGVQ9NUD9 493 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 RCOR3Q9P2K3 495 aaPredicted RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 MRPL42Q9Y6G3 142 aaKnown RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 NPHS1O60500 1241 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 FASP25445 335 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 GRM5P41594 1212 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 OXCT1P55809 520 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 PPIL2Q13356 520 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 PAFAH1B3Q15102 231 aaKnown RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 LDLRAP1Q5SW96 308 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 KCTD11Q693B1 232 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 ANKRD26P1Q6NSI1 321 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 RETREG3Q86VR2 466 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 CMTR2Q8IYT2 770 aaKnown RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 TANKQ92844 425 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 CELF6Q96J87 481 aaKnown RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 LRRC4Q9HBW1 653 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 CCM2LQ9NUG4 571 aaPredicted RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 GIMAP2Q9UG22 337 aa16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 PTBP2Q9UKA9 531 aaKnown RBP16.53■□□□□ 0.24
EFEMP1-202ENST00000394555 ZNF701M0R085 212 aaPredicted RBP16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 B4GAT1O43505 415 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 KCNH1O95259 989 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 PGK2P07205 417 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 CYP2C8P10632 490 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 TPI1P60174 286 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 YBX1P67809 324 aaKnown RBP16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 VPS26BQ4G0F5 336 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 ESRP1Q6NXG1 681 aaKnown RBP16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 PIGZQ86VD9 579 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 PPP1R10Q96QC0 940 aaKnown RBP16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 GBA3Q9H227 469 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 ZFYVE28Q9HCC9 887 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 ARMC1Q9NVT9 282 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.24
EFEMP1-202ENST00000394555 NME4O00746 187 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 DCLK1O15075 740 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 CHRM3P20309 590 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 CDH3P22223 829 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 ATP5F1P24539 256 aaPredicted RBP16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 PSMA4P25789 261 aaKnown RBP16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 CDH17Q12864 832 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 LAMC2Q13753 1193 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 CYP2A13Q16696 494 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 SLC36A3Q495N2 470 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 GALNT18Q6P9A2 607 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 ABRAXAS1Q6UWZ7 409 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 EXOC8Q8IYI6 725 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 AFAP1L2Q8N4X5 818 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 ZMAT2Q96NC0 199 aaKnown RBP16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 MRPL57Q9BQC6 102 aaKnown RBP16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 R3HDMLQ9H3Y0 253 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 SLC2A6Q9UGQ3 507 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 SARDHQ9UL12 918 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 TRIM17Q9Y577 477 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 SHROOM3Q8TF72 1996 aa16.52■□□□□ 0.23
EFEMP1-202ENST00000394555 AURKAO14965 403 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 DCKP27707 260 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 STX1BP61266 288 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 OTUD1Q5VV17 481 aaPredicted RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 ERO1BQ86YB8 467 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 MFSD2AQ8NA29 543 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 SLC45A3Q96JT2 553 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 NEURL2Q9BR09 285 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 MT-CYBP00156 380 aaPredicted RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 MTHFD1P11586 935 aaKnown RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 YBX3P16989 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 GNL1P36915 607 aaPredicted RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 INPP5AQ14642 412 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 DHRSXQ8N5I4 330 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 BPIFB6Q8NFQ5 453 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 IPMKQ8NFU5 416 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms