RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 PIM3Q86V86 326 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 SUSD3Q96L08 255 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 FAM96AQ9H5X1 160 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 NOL6Q9H6R4 1146 aaKnown RBP13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 FBXO5Q9UKT4 447 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 TCAF1Q9Y4C2 921 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 PTGDR2Q9Y5Y4 395 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 IRAK2O43187 625 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 CACNG3O60359 315 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 PRDX6P30041 224 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 GSTT1P30711 240 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 GRIK1P39086 918 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 OR1G1P47890 313 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 ARSDP51689 593 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 AIF1P55008 147 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 PRKAA1Q13131 559 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 OGFRL1Q5TC84 451 aaPredicted RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 BTBD8Q5XKL5 378 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 CLEC6AQ6EIG7 209 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 TRAF7Q6Q0C0 670 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 UGT2A3Q6UWM9 527 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SCN4BQ8IWT1 228 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 THEM5Q8N1Q8 247 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 JADE3Q92613 823 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SLC39A3Q9BRY0 314 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 FBRSL1Q9HCM7 1045 aaKnown RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 DSEQ9UL01 958 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 LRRC14BA6NHZ5 514 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 PPP6CO00743 305 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 CAPN15O75808 1086 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 F9P00740 461 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 YWHAQP27348 245 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SLC5A3P53794 718 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 FRG1Q14331 258 aaKnown RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 LIN52Q52LA3 116 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 C6orf52Q5T4I8 152 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 METTL21CQ5VZV1 264 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 CWF19L1Q69YN2 538 aaKnown RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 TMEM207Q6UWW9 146 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 CIR1Q86X95 450 aaPredicted RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SPATA2LQ8IUW3 424 aaPredicted RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 FCRL5Q96RD9 977 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 IL12RB2Q99665 862 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 SEMA6AQ9H2E6 1030 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 ZBTB26Q9HCK0 441 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 ABI2Q9NYB9 513 aaPredicted RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 MARCH4Q9P2E8 410 aaPredicted RBP13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 VWA8A3KMH1 1905 aa13.59□□□□□ -0.23
GTF2F1-201ENST00000394456 C15orf38-AP3S2A0A0A6YYH1 394 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 A0A1W2PQ45 241 aaPredicted RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 A0A1W2PQY0 241 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 MTSS1O43312 755 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 CNTN5O94779 1100 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 IGLV3-25P01717 112 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 HAPLN1P10915 354 aaPredicted RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 NELFEP18615 380 aaKnown RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 FGFR3P22607 806 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 NME5P56597 212 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 WNT3AP56704 352 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 YBX1P67809 324 aaKnown RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 ARPINQ7Z6K5 226 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 EXT2Q93063 718 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 TSGA13Q96PP4 275 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 VAT1Q99536 393 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 STARD7Q9NQZ5 370 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 TREX1Q9NSU2 369 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 RIMS3Q9UJD0 308 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 APPL1Q9UKG1 709 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 RAD54BQ9Y620 910 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 HS3ST4Q9Y661 456 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 A0A1W2PQH9 124 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 UBFD1O14562 309 aaKnown RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 CASQ2O14958 399 aaPredicted RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 CSPG5O95196 566 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 TBX18O95935 607 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 INHAP05111 366 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 CPB1P15086 417 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 CCNCP24863 283 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 PMLP29590 882 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 ITKQ08881 620 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 EIF4EBP2Q13542 120 aaPredicted RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 PPHLN1Q8NEY8 458 aaKnown RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms