RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM136AQ96C01 138 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 CIB4A0PJX0 185 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 M0QYT0 321 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 RP2O75695 350 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 ZNF3P17036 446 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 LHCGRP22888 699 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 FRRS1Q6ZNA5 592 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 ADGRF4Q8IZF3 695 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 SLC34A3Q8N130 599 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 MSH4O15457 936 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 ATP6V1G1O75348 118 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 SERPINA6P08185 405 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 GALK1P51570 392 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
USP49-203ENST00000394253 ADNP2Q6IQ32 1131 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 SNX20Q7Z614 316 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 ZSWIM2Q8NEG5 633 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 C12orf43Q96C57 262 aaKnown RBP13.49□□□□□ -0.25
USP49-203ENST00000394253 LIN37Q96GY3 246 aaPredicted RBP13.49□□□□□ -0.25
USP49-203ENST00000394253 RIIAD1A6NNX1 92 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 ACADVLP49748 655 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 RAPSNQ13702 412 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 KATNAL2Q8IYT4 538 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 FCRL4Q96PJ5 515 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 C17orf75Q9HAS0 396 aa13.49□□□□□ -0.25
USP49-203ENST00000394253 ANXA2P2A6NMY6 339 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 BCKDKO14874 412 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 GH2P01242 217 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 ANXA2P07355 339 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 FGFR1P11362 822 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 GZMAP12544 262 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 RPL10AP62906 217 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 CXorf57Q6NSI4 855 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 ZNF433Q8N7K0 673 aaPredicted RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 FAM126AQ9BYI3 521 aaPredicted RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 FADS2O95864 444 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 OVOS1Q6IE37 1185 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 WFS1O76024 890 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 AP2S1P53680 142 aaPredicted RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 USP43Q70EL4 1123 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TMC8Q8IU68 726 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 ADGRG2Q8IZP9 1017 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TEX19Q8NA77 164 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TOR1AIP2Q8NFQ8 470 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TMEM121Q9BTD3 319 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 NUDT15Q9NV35 164 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 LTFP02788 710 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 DBIP07108 87 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 CTSKP43235 329 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 CUL2Q13617 745 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 CLEC17AQ6ZS10 378 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 MSANTD3Q96H12 275 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 TDRKHQ9Y2W6 561 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 ANKDD1BA6NHY2 528 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 M0R129 80 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 ZNF709Q8N972 641 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 IL22Q9GZX6 179 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 RIPK2O43353 540 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 ZCCHC12Q6PEW1 402 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 FCGR1BQ92637 280 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 CNPPD1Q9BV87 410 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 PCDHGA12O60330 932 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 HLA-DRAP01903 254 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 RNF43Q68DV7 783 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 SYCE2Q6PIF2 218 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 RERGQ96A58 199 aaPredicted RBP13.48□□□□□ -0.25
USP49-203ENST00000394253 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
USP49-203ENST00000394253 ALDH7A1P49419 539 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 MYL6P60660 151 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 DNAJA2O60884 412 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 PAPSS2O95340 614 aaPredicted RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 PKNOX1P55347 436 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 LIPEQ05469 1076 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 CFAP206Q8IYR0 622 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 DOCK10Q96BY6 2186 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 NT5MQ9NPB1 228 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 KCNN3Q9UGI6 736 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ATP7BP35670 1465 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 OGTO15294 1046 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ATXN1P54253 815 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 NAGLUP54802 743 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 XKR3Q5GH77 459 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms