RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 VPS36Q86VN1 386 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 RBFAQ8N0V3 343 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 ZNF843Q8N446 348 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 PRR11Q96HE9 360 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 ZNF641Q96N77 438 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 NLRC4Q9NPP4 1024 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 PNMA8BQ9ULN7 279 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 A0A1W2PNU3 283 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 CFAP69A5D8W1 941 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 ANKRD62A6NC57 917 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 LRRC10BA6NIK2 292 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 EIF3CLB5ME19 914 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 RASA4BC9J798 803 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 RASA4O43374 803 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 ALPIP09923 528 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 TSHRP16473 764 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 HK3P52790 923 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 ADKP55263 362 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 LRRC14Q15048 493 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 ELOCQ15369 112 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 UGP2Q16851 508 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 FAXCQ5TGI0 409 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 BRAT1Q6PJG6 821 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 LEKR1Q6ZMV7 388 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 PHLDB2Q86SQ0 1253 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 CLEC14AQ86T13 490 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 DNAAF5Q86Y56 855 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 ARL14Q8N4G2 192 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 WDR36Q8NI36 951 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 SCG3Q8WXD2 468 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 HMCESQ96FZ2 354 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 ATXN7L3BQ96GX2 97 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 VCPIP1Q96JH7 1222 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 EIF3CQ99613 913 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 CNPY3Q9BT09 278 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 CLPBQ9H078 707 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 TCEAL2Q9H3H9 227 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 MBNL1Q9NR56 388 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 PADI4Q9UM07 663 aa17.67■□□□□ 0.42
SNRPA1-202ENST00000394082 NTN3O00634 580 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 MUSKO15146 869 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 KLK10O43240 276 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 CCP110O43303 1012 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 GJB6O95452 261 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 HTR1BP28222 390 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 CSNK1DP48730 415 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 NDST2P52849 883 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 VAC14Q08AM6 782 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 EIF3IQ13347 325 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 SYCP1Q15431 976 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 C3orf38Q5JPI3 329 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 PERM1Q5SV97 790 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 PPP1R15BQ5SWA1 713 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 RBM43Q6ZSC3 357 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 ZNF354CQ86Y25 554 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 PYROXD2Q8N2H3 581 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 ARL10Q8N8L6 244 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 OR6C4Q8NGE1 309 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 ATL2Q8NHH9 583 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 LIN37Q96GY3 246 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 TUBGCP5Q96RT8 1024 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 KLC2Q9H0B6 622 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 SUV39H2Q9H5I1 410 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 PDFQ9HBH1 243 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 LHX3Q9UBR4 397 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 RP1P56715 2156 aa17.66■□□□□ 0.42
SNRPA1-202ENST00000394082 LGALS16A8MUM7 142 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 TMX2-CTNND1H3BSU7 103 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 DESP17661 470 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 XPAP23025 273 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 CFHR1Q03591 330 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 C1orf61Q13536 156 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 SPIDRQ14159 915 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 IRF4Q15306 451 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 CYTH1Q15438 398 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 WSCD2Q2TBF2 565 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 PPP1R2P3Q6NXS1 205 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 DNAJC24Q6P3W2 148 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 ANKRD20A12PQ8NF67 263 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 NEK11Q8NG66 645 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 NAF1Q96HR8 494 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 ERGIC2Q96RQ1 377 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 CCDC3Q9BQI4 270 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 EDEM3Q9BZQ6 932 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 LRRC19Q9H756 370 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 FANCLQ9NW38 375 aa17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 UBA2Q9UBT2 640 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 LIMA1Q9UHB6 759 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-202ENST00000394082 ASH1LQ9NR48 2969 aaKnown RBP17.64■□□□□ 0.42
SNRPA1-202ENST00000394082 CCDC187A0A096LP49 1063 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 CREB3O43889 395 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 RASGRP1O95267 797 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 ITGA2BP08514 1039 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 CCDC172P0C7W6 258 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 C6P13671 934 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 PDX1P52945 283 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 COPB1P53618 953 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 NFATC4Q14934 902 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms