RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NPY2RP49146 381 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 UAP1Q16222 522 aaPredicted RBP24.48■■□□□ 1.51
LRFN4-202ENST00000393952 KYNUQ16719 465 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 C9orf64Q5T6V5 341 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 GRIN3AQ8TCU5 1115 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 FAM3CQ92520 227 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 TUBGCP5Q96RT8 1024 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 HEPHQ9BQS7 1158 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 SORCS3Q9UPU3 1222 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.48■■□□□ 1.51
LRFN4-202ENST00000393952 STON1Q9Y6Q2 735 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 WASF2Q9Y6W5 498 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 TRAFD1O14545 582 aaPredicted RBP24.47■■□□□ 1.51
LRFN4-202ENST00000393952 HTRA2O43464 458 aaPredicted RBP24.47■■□□□ 1.51
LRFN4-202ENST00000393952 FZD6O60353 706 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 SOCS5O75159 536 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 SIN3BO75182 1162 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 CPP00450 1065 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 FGF1P05230 155 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 WASP42768 502 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 MLF2Q15773 248 aaPredicted RBP24.47■■□□□ 1.51
LRFN4-202ENST00000393952 CCDC38Q502W7 563 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 ARMC12Q5T9G4 340 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 CHPFQ8IZ52 775 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 PYROXD1Q8WU10 500 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 UBLCP1Q8WVY7 318 aaPredicted RBP24.47■■□□□ 1.51
LRFN4-202ENST00000393952 LRRC39Q96DD0 335 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 PCDHB9Q9Y5E1 797 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 MAD1L1Q9Y6D9 718 aa24.47■■□□□ 1.51
LRFN4-202ENST00000393952 PGLSO95336 258 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 UGT2B4P06133 528 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 CD72P21854 359 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 HSD17B3P37058 310 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 ENPP2Q13822 863 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 CASC4Q6P4E1 433 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 TRMT10CQ7L0Y3 403 aaKnown RBP24.46■■□□□ 1.51
LRFN4-202ENST00000393952 STK40Q8N2I9 435 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 RMDN1Q96DB5 314 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 STAMBPL1Q96FJ0 436 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 EBNA1BP2Q99848 306 aaKnown RBP24.46■■□□□ 1.51
LRFN4-202ENST00000393952 TRIM56Q9BRZ2 755 aaKnown RBP24.46■■□□□ 1.51
LRFN4-202ENST00000393952 EPB41L4BQ9H329 900 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 SUV39H2Q9H5I1 410 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 IL36AQ9UHA7 158 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 CA14Q9ULX7 337 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 EPHX1P07099 455 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 CTSLP07711 333 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 GRM3Q14832 879 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 POU6F1Q14863 301 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 C2orf27AQ580R0 203 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 ARSIQ5FYB1 569 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 CFAP36Q96G28 342 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 SMIM14Q96QK8 99 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 ADGRE3Q9BY15 652 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 IL22Q9GZX6 179 aa24.46■■□□□ 1.51
LRFN4-202ENST00000393952 NPC1O15118 1278 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 LEFTY1O75610 366 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 ACSL3O95573 720 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 TTC4O95801 387 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 PRKCGP05129 697 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 MSLNQ13421 630 aaPredicted RBP24.45■■□□□ 1.5
LRFN4-202ENST00000393952 E2F5Q15329 346 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 QPCTQ16769 361 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 GDPD4Q6W3E5 623 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 CAPN12Q6ZSI9 719 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 ZSWIM9Q86XI8 627 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 PAF1Q8N7H5 531 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 ERLEC1Q96DZ1 483 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 PABPC3Q9H361 631 aaKnown RBP24.45■■□□□ 1.5
LRFN4-202ENST00000393952 ZNF446Q9NWS9 450 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 ZC3H7BQ9UGR2 993 aaKnown RBP24.45■■□□□ 1.5
LRFN4-202ENST00000393952 SUN2Q9UH99 717 aa24.45■■□□□ 1.5
LRFN4-202ENST00000393952 CKAP5Q14008 2032 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 RIPK2O43353 540 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 PIRTP0C851 137 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 SLC8A1P32418 973 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 GPX6P59796 221 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 PIH1D2Q8WWB5 315 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 ATXN2LQ8WWM7 1075 aaKnown RBP24.44■■□□□ 1.5
LRFN4-202ENST00000393952 OR8D1Q8WZ84 308 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 ECHDC3Q96DC8 303 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 ZNF641Q96N77 438 aaPredicted RBP24.44■■□□□ 1.5
LRFN4-202ENST00000393952 LRRC4CQ9HCJ2 640 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 PRSS16Q9NQE7 514 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 SAMD15Q9P1V8 674 aa24.44■■□□□ 1.5
LRFN4-202ENST00000393952 NDRG2Q9UN36 371 aaKnown RBP24.44■■□□□ 1.5
LRFN4-202ENST00000393952 ALADP13716 330 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 EPHB1P54762 984 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 CASP8Q14790 479 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 PALM2Q8IXS6 379 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 UHMK1Q8TAS1 419 aaKnown RBP24.43■■□□□ 1.5
LRFN4-202ENST00000393952 TTC25Q96NG3 672 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 KLHL32Q96NJ5 620 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 FAM129BQ96TA1 746 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 PLAC1Q9HBJ0 212 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 ARHGEF3Q9NR81 526 aa24.43■■□□□ 1.5
LRFN4-202ENST00000393952 ANKRD66B4E2M5 251 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 MAN2B1O00754 1011 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 SSTR1P30872 391 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 NTSR1P30989 418 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms