RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 KIAA1161Q6NSJ0 714 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 GCNT7Q6ZNI0 430 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 DAAM2Q86T65 1068 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 KIAA1328Q86T90 577 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 GATAD2AQ86YP4 633 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC22A18ASQ8N1D0 253 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 PAF1Q8N7H5 531 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMEM145Q8NBT3 493 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCNYQ8ND76 341 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 OR13H1Q8NG92 308 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 PDCD6IPQ8WUM4 868 aaKnown RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 HAUS1Q96CS2 278 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF599Q96NL3 588 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 PSKH2Q96QS6 385 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 LGMNQ99538 433 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC17A9Q9BYT1 436 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 CPEB1Q9BZB8 566 aaKnown RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZDHHC5Q9C0B5 715 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 ATP13A3Q9H7F0 1226 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 NOD2Q9HC29 1040 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 PCDH12Q9NPG4 1184 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TM7SF3Q9NS93 570 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 IMPACTQ9P2X3 320 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SAE1Q9UBE0 346 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 BTBD3Q9Y2F9 522 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 RALGAPA1Q6GYQ0 2036 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 A0A0A6YYK5 440 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 GRID2IPA4D2P6 1211 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 POM121BA6NF01 834 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 PRAMEF26H0Y7S4 382 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 TRAFD1O14545 582 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 PSTPIP1O43586 416 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 TSPAN6O43657 245 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 AP1G1O43747 822 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 C6P13671 934 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 CTPS1P17812 591 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 HNRNPA2B1P22626 353 aaKnown RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 XPAP23025 273 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 AKT2P31751 481 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 CDKN2BP42772 138 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 CSNK1DP48730 415 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 LIG3P49916 1009 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 AP1S1P61966 158 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 DSC2Q02487 901 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 BCL2L1Q07817 233 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 NSUN2Q08J23 767 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 RALGDSQ12967 914 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 BNIP3Q12983 259 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZBTB17Q13105 803 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 UGP2Q16851 508 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF423Q2M1K9 1284 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ODF2Q5BJF6 829 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF542PQ5EBM4 170 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 N4BP2L1Q5TBK1 243 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 LRRC38Q5VT99 294 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC9A4Q6AI14 798 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 C11orf63Q6NUN7 778 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 AADACL2Q6P093 401 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 NEK5Q6P3R8 708 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 IL27RAQ6UWB1 636 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPOCD1Q6ZMY3 1216 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 NYAP1Q6ZVC0 841 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 PTAR1Q7Z6K3 402 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 PIP4P1Q86T03 277 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCDC50Q8IVM0 306 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 NAXDQ8IW45 347 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCDC13Q8IYE1 715 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 TEX26Q8N6G2 289 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 CXorf40AQ8TE69 158 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 SETD7Q8WTS6 366 aaKnown RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 NSMCE1Q8WV22 266 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 RAB7BQ96AH8 199 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ECHDC3Q96DC8 303 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 FEM1CQ96JP0 617 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 BMFQ96LC9 184 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 NUDCD1Q96RS6 583 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 TUBGCP5Q96RT8 1024 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 KLF6Q99612 283 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 SEMA3CQ99985 751 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 MGME1Q9BQP7 344 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 HERPUD2Q9BSE4 406 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 HEMGNQ9BXL5 484 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 MAK16Q9BXY0 300 aaKnown RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 LUC7LQ9NQ29 371 aaKnown RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 GDF3Q9NR23 364 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 MBNL1Q9NR56 388 aaKnown RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 RBM22Q9NW64 420 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 DDX56Q9NY93 547 aaKnown RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 SEPT10Q9P0V9 454 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 DKK3Q9UBP4 350 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 PACSIN2Q9UNF0 486 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 DMTF1Q9Y222 760 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ATP8A1Q9Y2Q0 1164 aa7.73□□□□□ -1.17
HMGB3P1-201ENST00000393368 ASPMQ8IZT6 3477 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 hCG_1818297A0A087WSY0 165 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 A0A1B0GTQ1 180 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 F5H423 210 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 MATN3O15232 486 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms