RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PSMD3O43242 534 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 TMCC1O94876 653 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 HAUS5O94927 633 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 ZWINTO95229 277 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 LUC7L3O95232 432 aaKnown RBP15.1■□□□□ 0.01
MKS1-202ENST00000393119 SLC1A2P43004 574 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 CDK18Q07002 472 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 RIPK1Q13546 671 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 CDH18Q13634 790 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 PDK4Q16654 411 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 TMEM25Q86YD3 366 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 ELMOD1Q8N336 334 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 OR13C4Q8NGS5 318 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 FBXO6Q9NRD1 293 aaPredicted RBP15.1■□□□□ 0.01
MKS1-202ENST00000393119 ASB3Q9Y575 518 aa15.1■□□□□ 0.01
MKS1-202ENST00000393119 OBSL1O75147 1896 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 MAGEB16A2A368 324 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 ATP6V1G2O95670 118 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 PRLP01236 227 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 PAX7P23759 505 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 TYK2P29597 1187 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 CREMQ03060 361 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 LGSNQ5TDP6 509 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 GKAP1Q5VSY0 366 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 ASTLQ6HA08 431 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 TNS4Q8IZW8 715 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 USP13Q92995 863 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 IFT43Q96FT9 208 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 CPNE1Q99829 537 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 LBHD1Q9BQE6 289 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 MGME1Q9BQP7 344 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 PITPNM3Q9BZ71 974 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 C20orf27Q9GZN8 174 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 TMEM216Q9P0N5 145 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 MARCH4Q9P2E8 410 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 INTS6Q9UL03 887 aaKnown RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 SLC39A10Q9ULF5 831 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 PHTF1Q9UMS5 762 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 SSX2IPQ9Y2D8 614 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 FNDC3AQ9Y2H6 1198 aaKnown RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 SNX3O60493 162 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 GSRP00390 522 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 GSTA1P08263 222 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 DHRS4L1P0CG22 281 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 CCNFP41002 786 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 SERPINB4P48594 390 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 STK19P49842 368 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 SLC7A9P82251 487 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 SEMG2Q02383 582 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 LMAN2Q12907 356 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 ZNF470Q6ECI4 717 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 ATG14Q6ZNE5 492 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 CHST9Q7L1S5 443 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 SETD3Q86TU7 594 aaPredicted RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 SLC41A1Q8IVJ1 513 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 CCDC63Q8NA47 563 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 ITFG1Q8TB96 612 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 PHOSPHO2Q8TCD6 241 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 LRRC8CQ8TDW0 803 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 HDAC10Q969S8 669 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 VPS39Q96JC1 886 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 TBATAQ96M53 351 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 LRRC3BQ96PB8 259 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 PSKH2Q96QS6 385 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 NDNQ99608 321 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 MCMBPQ9BTE3 642 aa15.09■□□□□ 0.01
MKS1-202ENST00000393119 SSU72Q9NP77 194 aaKnown RBP15.09■□□□□ 0.01
MKS1-202ENST00000393119 MYOFQ9NZM1 2061 aa15.08■□□□□ 0.01
MKS1-202ENST00000393119 GOLGA8CPA6NN73 597 aa15.08■□□□□ 0
MKS1-202ENST00000393119 LDB2O43679 373 aa15.08■□□□□ 0
MKS1-202ENST00000393119 CR2P20023 1033 aa15.08■□□□□ 0
MKS1-202ENST00000393119 KCNA4P22459 653 aa15.08■□□□□ 0
MKS1-202ENST00000393119 SERPINB9P50453 376 aa15.08■□□□□ 0
MKS1-202ENST00000393119 SLC18A1P54219 525 aa15.08■□□□□ 0
MKS1-202ENST00000393119 N4BP2L1Q5TBK1 243 aaPredicted RBP15.08■□□□□ 0
MKS1-202ENST00000393119 CNSTQ6PJW8 725 aa15.08■□□□□ 0
MKS1-202ENST00000393119 TMC5Q6UXY8 1006 aa15.08■□□□□ 0
MKS1-202ENST00000393119 HTR3DQ70Z44 454 aa15.08■□□□□ 0
MKS1-202ENST00000393119 OTOAQ7RTW8 1153 aa15.08■□□□□ 0
MKS1-202ENST00000393119 NAT14Q8WUY8 206 aa15.08■□□□□ 0
MKS1-202ENST00000393119 FATE1Q969F0 183 aa15.08■□□□□ 0
MKS1-202ENST00000393119 DNAJC1Q96KC8 554 aaKnown RBP15.08■□□□□ 0
MKS1-202ENST00000393119 TRIB3Q96RU7 358 aa15.08■□□□□ 0
MKS1-202ENST00000393119 IQCGQ9H095 443 aaKnown RBP15.08■□□□□ 0
MKS1-202ENST00000393119 TNKS2Q9H2K2 1166 aa15.08■□□□□ 0
MKS1-202ENST00000393119 ARNT2Q9HBZ2 717 aa15.08■□□□□ 0
MKS1-202ENST00000393119 SEPT3Q9UH03 358 aa15.08■□□□□ 0
MKS1-202ENST00000393119 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.08■□□□□ 0
MKS1-202ENST00000393119 EPOPA6NHQ4 379 aa15.07■□□□□ 0
MKS1-202ENST00000393119 TM9SF1O15321 606 aa15.07■□□□□ 0
MKS1-202ENST00000393119 BNIP3LO60238 219 aa15.07■□□□□ 0
MKS1-202ENST00000393119 ZNF189O75820 626 aaPredicted RBP15.07■□□□□ 0
MKS1-202ENST00000393119 SERPINF2P08697 491 aa15.07■□□□□ 0
MKS1-202ENST00000393119 LIMK2P53671 638 aa15.07■□□□□ 0
MKS1-202ENST00000393119 TNK2Q07912 1038 aa15.07■□□□□ 0
MKS1-202ENST00000393119 RBM20Q5T481 1227 aaKnown RBP15.07■□□□□ 0
MKS1-202ENST00000393119 TSTD2Q5T7W7 516 aa15.07■□□□□ 0
MKS1-202ENST00000393119 GRTP1Q5TC63 336 aa15.07■□□□□ 0
MKS1-202ENST00000393119 ZC3HC1Q86WB0 502 aaKnown RBP15.07■□□□□ 0
MKS1-202ENST00000393119 CEP97Q8IW35 865 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms