RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MAP3K6O95382 1288 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 TIMP2P16035 220 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 P2RY2P41231 377 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 CCR5P51681 352 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
USP44-202ENST00000393091 RNASEH2BQ5TBB1 312 aaKnown RBP13.38□□□□□ -0.27
USP44-202ENST00000393091 ARHGEF18Q6ZSZ5 1173 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 PID1Q7Z2X4 250 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 LONP2Q86WA8 852 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 ZBTB44Q8NCP5 570 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 CADM4Q8NFZ8 388 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 TRABDQ9H4I3 376 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 EVLQ9UI08 416 aaPredicted RBP13.38□□□□□ -0.27
USP44-202ENST00000393091 LRP4O75096 1905 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 DNALI1O14645 258 aaPredicted RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 NDST3O95803 873 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 FGF1P05230 155 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 PTPN5P54829 565 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 ERN2Q76MJ5 926 aaKnown RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 CCDC110Q8TBZ0 833 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 PRCCQ92733 491 aaPredicted RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 ZC3H10Q96K80 434 aaKnown RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 FOXP3Q9BZS1 431 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 C2orf42Q9NWW7 574 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 RAI2Q9Y5P3 530 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 TP53BP1Q12888 1972 aaPredicted RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 TCRBV21S2A2A0A5A6 115 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 NFKBIAP25963 317 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 PSMB4P28070 264 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 NEK3P51956 506 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 CAV1Q03135 178 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 HIBCHQ6NVY1 386 aaPredicted RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 ZSWIM9Q86XI8 627 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 LENG8Q96PV6 779 aaPredicted RBP13.37□□□□□ -0.27
USP44-202ENST00000393091 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
USP44-202ENST00000393091 CAPN8A6NHC0 703 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 C16orf96A6NNT2 1141 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 UPK3BL1B0FP48 263 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 UPK3BL2E5RIL1 263 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 TSPAN6O43657 245 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 ZNF30P17039 623 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 CDK18Q07002 472 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 MORF4L2Q15014 288 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ZNF765Q7L2R6 523 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ADAT2Q7Z6V5 191 aaKnown RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 TSTD1Q8NFU3 115 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 FAM118BQ9BPY3 351 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ETNK1Q9HBU6 452 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 HACD3Q9P035 362 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 A0A0J9YYE9 177 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 TOR1BO14657 336 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 TRBC1P01850 177 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ITIH2P19823 946 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 MMP12P39900 470 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 CD86P42081 329 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 KCNJ1P48048 391 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 SNX1Q13596 522 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 LLGL1Q15334 1064 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 TTC31Q49AM3 519 aaPredicted RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 LRRC8BQ6P9F7 803 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 SLC36A4Q6YBV0 504 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ZNF534Q76KX8 674 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 PARS2Q7L3T8 475 aaKnown RBP13.36□□□□□ -0.27
USP44-202ENST00000393091 CYP2U1Q7Z449 544 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 TMPRSS6Q8IU80 811 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 RELL1Q8IUW5 271 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 PPIL6Q8IXY8 311 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 FAM174AQ8TBP5 190 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 AGAP3Q96P47 875 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 PCDHGA2Q9Y5H1 932 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 LATO43561 262 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 CPP00450 1065 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ADRB3P13945 408 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 SLC8A1P32418 973 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 TAS2R38P59533 333 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 RALGDSQ12967 914 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 SLC1A5Q15758 541 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ACCSLQ4AC99 568 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms