RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ERCC2P18074 760 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 RPL10AP62906 217 aaKnown RBP19.17■□□□□ 0.66
CCDC50-202ENST00000392456 GAD2Q05329 585 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 USP43Q70EL4 1123 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 TRMT10CQ7L0Y3 403 aaKnown RBP19.17■□□□□ 0.66
CCDC50-202ENST00000392456 CCDC25Q86WR0 208 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 MIB1Q86YT6 1006 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 ACMSDQ8TDX5 336 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 DDI1Q8WTU0 396 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 SGF29Q96ES7 293 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 TCF12Q99081 682 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 FRMD8P1Q9BZ68 369 aaPredicted RBP19.17■□□□□ 0.66
CCDC50-202ENST00000392456 SLCO1B3Q9NPD5 702 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 NUP205Q92621 2012 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 KIAA1671Q9BY89 1806 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 ARHGAP33O14559 1287 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 DCLK1O15075 740 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 ITM2AO43736 263 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 LILRB3O75022 631 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 GUCY1B2O75343 617 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 PAGE1O75459 146 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 SRGAP2BP0DMP2 458 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 PGM1P36871 562 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 BTKQ06187 659 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 RGS9BPQ6ZS82 235 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 HERC6Q8IVU3 1022 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 MARVELD2Q8N4S9 558 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 PCDH9Q9HC56 1237 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 RCOR3Q9P2K3 495 aaPredicted RBP19.17■□□□□ 0.66
CCDC50-202ENST00000392456 INSL6Q9Y581 213 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 PCDHB12Q9Y5F1 795 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 PLXNA3P51805 1871 aa19.17■□□□□ 0.66
CCDC50-202ENST00000392456 H3BRJ5 948 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 KCNN4O15554 427 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 MAGEC1O60732 1142 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 HMGA1P17096 107 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 WDR4P57081 412 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 APOFQ13790 326 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 TRMT5Q32P41 509 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 RIPOR1Q6ZS17 1223 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 NPWQ8N729 165 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 LILRB4Q8NHJ6 448 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 SPOCK2Q92563 424 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 FAM161BQ96MY7 647 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 TRIM62Q9BVG3 475 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 ALG13Q9NP73 1137 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 NCKIPSDQ9NZQ3 722 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 VPS51Q9UID3 782 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 MOSPD1Q9UJG1 213 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 NEU3Q9UQ49 428 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 DNAJC16Q9Y2G8 782 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 TCRBV7S3A2A0A539 114 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 ARHGEF15O94989 841 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 ATP6V1B1P15313 513 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 CDK9P50750 372 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 AIF1P55008 147 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 NUP107P57740 925 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 ACTR3P61158 418 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 ANKRD22Q5VYY1 191 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 SLC38A6Q8IZM9 456 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 CLP1Q92989 425 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 BTBD9Q96Q07 612 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 PANX3Q96QZ0 392 aa19.16■□□□□ 0.66
CCDC50-202ENST00000392456 MRPL17Q9NRX2 175 aaKnown RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 ARIH1Q9Y4X5 557 aaPredicted RBP19.16■□□□□ 0.66
CCDC50-202ENST00000392456 KCNU1A8MYU2 1149 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 ZDHHC11BP0C7U3 371 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 MYOGP15173 224 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 KRT4P19013 534 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 CCR1P32246 355 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 ETV3P41162 512 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 TPI1P60174 286 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 MTM1Q13496 603 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 RAB33AQ14088 237 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 C10orf120Q5SQS8 335 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 PCYOX1LQ8NBM8 494 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 SLC39A13Q96H72 371 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 CDC42EP4Q9H3Q1 356 aaKnown RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 ZNF696Q9H7X3 374 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 LIN28AQ9H9Z2 209 aaKnown RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 TLR8Q9NR97 1041 aaKnown RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 YIPF1Q9Y548 306 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 TXNDC9O14530 226 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 DNALI1O14645 258 aaPredicted RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 SPAG7O75391 227 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 HMBSP08397 361 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 CNPP09543 421 aaKnown RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 PCSK7Q16549 785 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 MSANTD2Q6P1R3 559 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 MMAAQ8IVH4 418 aaKnown RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 DCLK2Q8N568 766 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 PLEKHA8Q96JA3 519 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 FCRL2Q96LA5 508 aaPredicted RBP19.15■□□□□ 0.66
CCDC50-202ENST00000392456 TTLL2Q9BWV7 592 aa19.15■□□□□ 0.66
CCDC50-202ENST00000392456 SZT2Q5T011 3432 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 GOLGA8MH3BSY2 632 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 TLL1O43897 1013 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 ACSL3O95573 720 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 STAMBPO95630 424 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 ABCB1P08183 1280 aaPredicted RBP19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms