RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NOD2Q9HC29 1040 aa15.18■□□□□ 0.02
IGHV3-53-201ENST00000390627 SLC6A14Q9UN76 642 aa15.18■□□□□ 0.02
IGHV3-53-201ENST00000390627 DMTF1Q9Y222 760 aa15.18■□□□□ 0.02
IGHV3-53-201ENST00000390627 EP300Q09472 2414 aaPredicted RBP15.18■□□□□ 0.02
IGHV3-53-201ENST00000390627 A0A1W2PQU0 124 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 PATE3B3GLJ2 98 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 TRAFD1O14545 582 aaPredicted RBP15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 AREL1O15033 823 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 HTRA2O43464 458 aaPredicted RBP15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 JCHAINP01591 159 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 TIMP2P16035 220 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 CA4P22748 312 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 NFKBIAP25963 317 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZBTB17Q13105 803 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 TEAD4Q15561 434 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 UGP2Q16851 508 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 AASDHQ4L235 1098 aaPredicted RBP15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 SLC45A4Q5BKX6 768 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 AADACL2Q6P093 401 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZC3H18Q86VM9 953 aaKnown RBP15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 KIAA2013Q8IYS2 634 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 QKIQ96PU8 341 aaKnown RBP eCLIP15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 FERMT1Q9BQL6 677 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 HERPUD2Q9BSE4 406 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 SEPT10Q9P0V9 454 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 ATP8A1Q9Y2Q0 1164 aa15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 PTPRZ1P23471 2315 aaPredicted RBP15.17■□□□□ 0.02
IGHV3-53-201ENST00000390627 TTC24A2A3L6 582 aaPredicted RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 H7C0C1 242 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZNF189O75820 626 aaPredicted RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 SYPP08247 313 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 MAT2AP31153 395 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ATP5OP48047 213 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 AFF3P51826 1226 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 RACK1P63244 317 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 OTUD4Q01804 1114 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 DSC2Q02487 901 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 LRRC73Q5JTD7 316 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ARMC12Q5T9G4 340 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 TCEAL6Q6IPX3 200 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 NAPEPLDQ6IQ20 393 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 CDKL3Q8IVW4 592 aaPredicted RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 C1orf216Q8TAB5 229 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 CXorf40AQ8TE69 158 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 PDCD6IPQ8WUM4 868 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 TCEAL3Q969E4 200 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 VAT1Q99536 393 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ORAI3Q9BRQ5 295 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 CARD9Q9H257 536 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 CAPN10Q9HC96 672 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 TM9SF3Q9HD45 589 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 PCDH12Q9NPG4 1184 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZFR2Q9UPR6 939 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ITM2BQ9Y287 266 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 PCDHGC4Q9Y5F7 938 aa15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
IGHV3-53-201ENST00000390627 ANKRD36A6QL64 1941 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 LNP1A1A4G5 178 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 PRAMEF26H0Y7S4 382 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 SPINT1O43278 529 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 CPP00450 1065 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 PTPN3P26045 913 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 GRIA4P48058 902 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 EIF3EP60228 445 aaKnown RBP15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 IRX4P78413 519 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ARHGAP8P85298 464 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 TRAF2Q12933 501 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZNF284Q2VY69 593 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 TMEM259Q4ZIN3 620 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 TEX44Q53QW1 395 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 SEL1L3Q68CR1 1132 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 B4GALNT4Q76KP1 1039 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ADAT2Q7Z6V5 191 aaKnown RBP15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZSWIM9Q86XI8 627 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 CNTD1Q8N815 330 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 HTR3CQ8WXA8 447 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 SKA1Q96BD8 255 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 NSMCE3Q96MG7 304 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 SLC6A18Q96N87 628 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 AGAP3Q96P47 875 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 EDEM2Q9BV94 578 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 ZDHHC5Q9C0B5 715 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 EBF2Q9HAK2 575 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 AASDHPPTQ9NRN7 309 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 PCDHB9Q9Y5E1 797 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 RAI2Q9Y5P3 530 aa15.15■□□□□ 0.02
IGHV3-53-201ENST00000390627 KCNK3O14649 394 aa15.14■□□□□ 0.01
IGHV3-53-201ENST00000390627 RIOK3O14730 519 aaKnown RBP15.14■□□□□ 0.01
IGHV3-53-201ENST00000390627 SLC31A1O15431 190 aa15.14■□□□□ 0.01
IGHV3-53-201ENST00000390627 PGLSO95336 258 aa15.14■□□□□ 0.01
IGHV3-53-201ENST00000390627 RBP3P10745 1247 aa15.14■□□□□ 0.01
IGHV3-53-201ENST00000390627 ENGP17813 658 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms