RNA–Protein interactions for RNA: ENST00000390617.2

IGHV3-35-201, Transcript of immunoglobulin heavy variable 3-35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGHV3-35, Length 366 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35-201ENST00000390617 TCEA3O75764 348 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 TMCC1O94876 653 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 IGSF6O95976 241 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 TPM3P06753 285 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 IGFALSP35858 605 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 TMPRSS3P57727 454 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 NR0B2Q15466 257 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 DEFB133Q30KQ1 61 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 INO80DQ53TQ3 878 aaPredicted RBP15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 C6orf132Q5T0Z8 1188 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 ATXN7L2Q5T6C5 722 aaPredicted RBP15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 LEKR1Q6ZMV7 388 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 MACC1Q6ZN28 852 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 MON1BQ7L1V2 547 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 SLFN11Q7Z7L1 901 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 TTC7BQ86TV6 843 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 PHACTR4Q8IZ21 702 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 RBFAQ8N0V3 343 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 RTL3Q8N8U3 475 aaKnown RBP15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 WDR48Q8TAF3 677 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 GLMNQ92990 594 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 MCEEQ96PE7 176 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 NOL6Q9H6R4 1146 aaKnown RBP15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 TAS2R14Q9NYV8 317 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 IFNKQ9P0W0 207 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 DKK3Q9UBP4 350 aa15.28■□□□□ 0.04
IGHV3-35-201ENST00000390617 ATMQ13315 3056 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 CPED1A4D0V7 1026 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 LMO7DNF2Z398 122 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 ERVH48-1M5A8F1 160 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 GCATO75600 419 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 RPIAP49247 311 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 SUOXP51687 545 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 AIF1P55008 147 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 YBEYP58557 167 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 PRRT3Q5FWE3 981 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 RBM44Q6ZP01 1051 aaKnown RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 ZNF571Q7Z3V5 609 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 VPS36Q86VN1 386 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 ZNF354CQ86Y25 554 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 TP53I13Q8NBR0 393 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 CXorf40AQ8TE69 158 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 KCNE4Q8WWG9 221 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 NAT6Q93015 286 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 VCPIP1Q96JH7 1222 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 EPAS1Q99814 870 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 LRRC61Q9BV99 259 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 CPEB1Q9BZB8 566 aaKnown RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 DPH1Q9BZG8 443 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 SLC13A1Q9BZW2 595 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 TCEAL2Q9H3H9 227 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 PARVAQ9NVD7 372 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 PNMA8BQ9ULN7 279 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 SATB2Q9UPW6 733 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 PCDHGA8Q9Y5G5 932 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 ENTPD2Q9Y5L3 495 aa15.27■□□□□ 0.04
IGHV3-35-201ENST00000390617 COL6A6A6NMZ7 2263 aa15.27■□□□□ 0.03
IGHV3-35-201ENST00000390617 WASH4PA8MWX3 477 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 MMP20O60882 483 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 EPHB2P29323 1055 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 EIF4A3P38919 411 aaKnown RBP15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 BLKP51451 505 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 ZNF143P52747 638 aaPredicted RBP15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 ADKP55263 362 aaKnown RBP15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 RHOAP61586 193 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 RPL7AP62424 266 aaKnown RBP15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 ELP6Q0PNE2 266 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 NFKBIBQ15653 356 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 PARP15Q460N3 678 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 TMEM52BQ4KMG9 183 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 C3orf38Q5JPI3 329 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 EFHC2Q5JST6 749 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 LRRC73Q5JTD7 316 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 PERM1Q5SV97 790 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 PCSK4Q6UW60 755 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 SLC35F3Q8IY50 421 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 HCAR2Q8TDS4 363 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 ATXN7L3BQ96GX2 97 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 SLC46A1Q96NT5 459 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 TSPY26PQ9H489 355 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 MBNL1Q9NR56 388 aaKnown RBP15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
IGHV3-35-201ENST00000390617 A0A1W2PNU3 283 aaPredicted RBP15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 TCRBV5S1A1TA0A578 114 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 CAPN8A6NHC0 703 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 MUSKO15146 869 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 CCP110O43303 1012 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 ANXA6P08133 673 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 TIMP2P16035 220 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 PSMA2P25787 234 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 RBMS1P29558 406 aaKnown RBP15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 MLLT3P42568 568 aaPredicted RBP15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 PEX5P50542 639 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 SKOR1P84550 965 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 RHDQ02161 417 aa15.25■□□□□ 0.03
IGHV3-35-201ENST00000390617 PPARDQ03181 441 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms