RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TRAPPC10P48553 1259 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 ACSM2AQ08AH3 577 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 ZBTB17Q13105 803 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 EFNB3Q15768 340 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 CALCRLQ16602 461 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 ESCO2Q56NI9 601 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 STPG1Q5TH74 334 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 C17orf99Q6UX52 265 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 IL20RBQ6UXL0 311 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 MOB3CQ70IA8 216 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 SHFQ7M4L6 423 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 SAMD3Q8N6K7 520 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 KBTBD3Q8NAB2 608 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 SPATA22Q8NHS9 363 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 SPPL3Q8TCT6 385 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 LRFN5Q96NI6 719 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 FAM167BQ9BTA0 163 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 MROH8Q9H579 483 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 EPHX3Q9H6B9 360 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 LRRC4Q9HBW1 653 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 GDAQ9Y2T3 454 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
TRAV40-201ENST00000390467 IGHV4OR15-8A0A075B7B6 117 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PABPN1LA6NDY0 278 aaKnown RBP3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PEX12O00623 359 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PER2O15055 1255 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 CEP104O60308 925 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 LMX1BO60663 402 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 DHRS4L1P0CG22 281 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 NLRP5P59047 1200 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 KRT72Q14CN4 511 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 CES5AQ6NT32 575 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 UNQ6126/PRO20091Q6UXV3 157 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 DSTYKQ6XUX3 929 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 TUBA1AQ71U36 451 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PRSS45Q7RTY3 260 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 FOXP4Q8IVH2 680 aaPredicted RBP3.4□□□□□ -1.87
TRAV40-201ENST00000390467 HERC6Q8IVU3 1022 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 FTSJ3Q8IY81 847 aaKnown RBP3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PARP16Q8N5Y8 322 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF385AQ96PM9 386 aaKnown RBP3.4□□□□□ -1.87
TRAV40-201ENST00000390467 TUBA1CQ9BQE3 449 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PAGR1Q9BTK6 254 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 EVA1AQ9H8M9 152 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 UBTD1Q9HAC8 227 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 EBF2Q9HAK2 575 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF224Q9NZL3 707 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 SLCO3A1Q9UIG8 710 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 ADAM18Q9Y3Q7 739 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 PCDHAC2Q9Y5I4 1007 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 A3GALT2U3KPV4 340 aa3.4□□□□□ -1.87
TRAV40-201ENST00000390467 C17orf113A0A1B0GUU1 675 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 VWA3AA6NCI4 1184 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 HNRNPCL2B2RXH8 293 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 KLRF2D3W0D1 207 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 WNT9BO14905 357 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 KLK10O43240 276 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 ANP32CO43423 234 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 ZIC3O60481 467 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 NDUFS7O75251 213 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CNPP09543 421 aaKnown RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 WEE2P0C1S8 567 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CLDN2P57739 230 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 RBM39Q14498 530 aaKnown RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 RBBP5Q15291 538 aaKnown RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 OASLQ15646 514 aaKnown RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 MRGPRG-AS1Q2M3A8 158 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 SOWAHAQ2M3V2 549 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF667Q5HYK9 610 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF449Q6P9G9 518 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 NEK10Q6ZWH5 1172 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 SATL1Q86VE3 508 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 ZC3HC1Q86WB0 502 aaKnown RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 DCUN1D3Q8IWE4 304 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CIARTQ8N365 385 aaPredicted RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CPXM2Q8N436 756 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 LMNTD1Q8N9Z9 388 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 GJC3Q8NFK1 279 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CREB3L4Q8TEY5 395 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CNOT9Q92600 299 aaKnown RBP3.39□□□□□ -1.87
TRAV40-201ENST00000390467 MTBPQ96DY7 904 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 C3orf30Q96M34 536 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 COG8Q96MW5 612 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 OR1F2PQ96R84 312 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 TWNKQ96RR1 684 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 SMARCAL1Q9NZC9 954 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 SIX4Q9UIU6 781 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 CDC14AQ9UNH5 594 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 SNX9Q9Y5X1 595 aa3.39□□□□□ -1.87
TRAV40-201ENST00000390467 TYW5A2RUC4 315 aaKnown RBP3.38□□□□□ -1.87
TRAV40-201ENST00000390467 SH2D7A6NKC9 451 aaPredicted RBP3.38□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF587BE7ETH6 402 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 KLK8O60259 260 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 GAGE7O76087 117 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 GAGE12FP0CL80 117 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 GAGE12GP0CL81 117 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 GAGE12IP0CL82 117 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms