RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 ZBTB49Q6ZSB9 765 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 KCTD8Q6ZWB6 473 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PRSS48Q7RTY5 328 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PIWIL3Q7Z3Z3 882 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 NANOGNBQ7Z5D8 188 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ZBTB46Q86UZ6 589 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ZC3HC1Q86WB0 502 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 MCF2L2Q86YR7 1114 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 IFNLR1Q8IU57 520 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 LACC1Q8IV20 430 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 MMAAQ8IVH4 418 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CNTN4Q8IWV2 1026 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 AQP12AQ8IXF9 295 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 RIMKLAQ8IXN7 391 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CHPFQ8IZ52 775 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 OFCC1Q8IZS5 231 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ZNF786Q8N393 782 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 TTC30BQ8N4P2 665 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PCDH20Q8N6Y1 951 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 Q8N9G6 341 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 KCTD6Q8NC69 237 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 DDHD1Q8NEL9 900 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 DNERQ8NFT8 737 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PJA1Q8NG27 643 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 OR9I1Q8NGQ6 314 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 LILRB4Q8NHJ6 448 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PPP1R14CQ8TAE6 165 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PNPT1Q8TCS8 783 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 URGCPQ8TCY9 931 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ZFP90Q8TF47 636 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 RAB2BQ8WUD1 216 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ISG20Q96AZ6 181 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 GPRASP2Q96D09 838 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 TMA16Q96EY4 203 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 VPS39Q96JC1 886 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 GLT1D1Q96MS3 346 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CSPG4P5Q96PW8 444 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ZNF300Q96RE9 604 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 KCTD15Q96SI1 283 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PCYT2Q99447 389 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 SLC30A3Q99726 388 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 BCL7BQ9BQE9 202 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 NAT9Q9BTE0 207 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 MSTO1Q9BUK6 570 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 MLPHQ9BV36 600 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 HERC2P3Q9BVR0 1158 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CALN1Q9BXU9 219 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ACE2Q9BYF1 805 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ILKAPQ9H0C8 392 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 VPS33BQ9H267 617 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 SOX17Q9H6I2 414 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 NOL11Q9H8H0 719 aaKnown RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 EFCAB1Q9HAE3 211 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 NTN4Q9HB63 628 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PTPRHQ9HD43 1115 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 C8orf4Q9NR00 106 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ATAD3AQ9NVI7 634 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PAK1IP1Q9NWT1 392 aaPredicted RBP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 GID8Q9NWU2 228 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CMTM6Q9NX76 183 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 GTSE1Q9NYZ3 720 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.48□□□□□ -1.85
TRAV39-201ENST00000390466 MAP10Q9P2G4 905 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 VTI1BQ9UEU0 232 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 FBXO40Q9UH90 709 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 VPS51Q9UID3 782 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PSME2Q9UL46 239 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CDYLQ9Y232 598 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ANKRD6Q9Y2G4 727 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 IFT52Q9Y366 437 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 PCDHA9Q9Y5H5 950 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 TLL2Q9Y6L7 1015 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 COL1A2P08123 1366 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 MN1Q10571 1320 aaPredicted RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 A0A0U1RQS6 177 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 DHRS12A0PJE2 317 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 MAGEB16A2A368 324 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 DYTNA2CJ06 578 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 A8MU76 341 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 KPNA7A9QM74 516 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 HACD1B0YJ81 288 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 SPATA31C2B4DYI2 1134 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 SLCO1B7G3V0H7 640 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 H0YCG3 227 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 I6L893 689 aaPredicted RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 TNFRSF10AO00220 468 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 EIF3FO00303 357 aaPredicted RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 PIK3R2O00459 728 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 NOP56O00567 594 aaKnown RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 KPNA4O00629 521 aaPredicted RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 MRASO14807 208 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 PPEF1O14829 653 aaPredicted RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 GIPC1O14908 333 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 LSM1O15116 133 aaKnown RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 ARPC2O15144 300 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 OGTO15294 1046 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 CFLARO15519 480 aa3.47□□□□□ -1.85
TRAV39-201ENST00000390466 PHGDHO43175 533 aaKnown RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 HOXC11O43248 304 aaPredicted RBP3.47□□□□□ -1.85
TRAV39-201ENST00000390466 TPD52L2O43399 206 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms