RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 USE1Q9NZ43 259 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 SNX8Q9Y5X2 465 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 WNT7BP56706 349 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PCID2Q5JVF3 399 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 REP15Q6BDI9 236 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 CENPSQ8N2Z9 138 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 FBXO39Q8N4B4 442 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PTGR2Q8N8N7 351 aaPredicted RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 OR52K2Q8NGK3 314 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 UTP15Q8TED0 518 aaKnown RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 DTLQ9NZJ0 730 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 BTBD3Q9Y2F9 522 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 GPR25O00155 361 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 TNPO2O14787 897 aaKnown RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 SPTLC1O15269 473 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 FARP2O94887 1054 aaPredicted RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 USP17L7P0C7H9 530 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 LINC00032P0C843 101 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 SLC2A4P14672 509 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 NCK1P16333 377 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PRKCHP24723 683 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 CCR1P32246 355 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 ZNF252P-AS1Q0IIN9 211 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 ZBED5Q49AG3 693 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 ZRANB3Q5FWF4 1079 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 MBLAC2Q68D91 279 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 SPATA2LQ8IUW3 424 aaPredicted RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 ANKRD52Q8NB46 1076 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 RDH11Q8TC12 318 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PEBP4Q96S96 227 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 WDR12Q9GZL7 423 aaKnown RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 TMEM161AQ9NX61 479 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 TRAF6Q9Y4K3 522 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 BHMG1C9JSJ3 638 aaPredicted RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 E7ENX8 843 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 MDM4O15151 490 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 CAPN1P07384 714 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 PCSK1P29120 753 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 RAD51Q06609 339 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 HSDL1Q3SXM5 330 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 TIGD2Q4W5G0 525 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 TMEM192Q8IY95 271 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 MOCOSQ96EN8 888 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 OR12D3Q9UGF7 316 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 PEX10O60683 326 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 CYP4B1P13584 511 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 MATKP42679 507 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 BAG6P46379 1132 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 CHST15Q7LFX5 561 aaPredicted RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 CAND1Q86VP6 1230 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 MRPL57Q9BQC6 102 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 UGT2B28Q9BY64 529 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 RHOJQ9H4E5 214 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 EIF3LQ9Y262 564 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 FAM32AQ9Y421 112 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 MAFBQ9Y5Q3 323 aaPredicted RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 H3BRB1 525 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 EI24O14681 340 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 LZTS3O60299 673 aaPredicted RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 SERPINI2O75830 405 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 HOXC6P09630 235 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 CTSHP09668 335 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 CSTF3Q12996 717 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 TMEM214Q6NUQ4 689 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 STX19Q8N4C7 294 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 S100ZQ8WXG8 99 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 ACOX2Q99424 681 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 TUT1Q9H6E5 874 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 LTA4HP09960 611 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 GMPRP36959 345 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 ZC3H12BQ5HYM0 836 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 ZNF540Q8NDQ6 660 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 C17orf50Q8WW18 174 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 KCNK13Q9HB14 408 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 VTA1Q9NP79 307 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 PNPLA8Q9NP80 782 aa14.34□□□□□ -0.11
RTF1-201ENST00000389629 TRMT6Q9UJA5 497 aaKnown RBP14.34□□□□□ -0.11
RTF1-201ENST00000389629 A0A087X1B8 175 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 TMEM233B4DJY2 109 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 FBXO21O94952 628 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 ATP6V1E1P36543 226 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 PWP1Q13610 501 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 TBC1D25Q3MII6 688 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 ANKS6Q68DC2 871 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 ANKRD13AQ8IZ07 590 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 SVOPQ8N4V2 548 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 TMIGD2Q96BF3 282 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 SIGLEC10Q96LC7 697 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 VAT1Q99536 393 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 ARHGEF4Q9NR80 690 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 NUDT5Q9UKK9 219 aa14.33□□□□□ -0.11
RTF1-201ENST00000389629 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.11
RTF1-201ENST00000389629 PLCH1Q4KWH8 1693 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 ZBTB7AO95365 584 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 ALOX5P09917 674 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms