RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 SNRPD1P62314 119 aaKnown RBP27.04■■□□□ 1.92
MSX1-201ENST00000382723 TMED2Q15363 201 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 AGBL2Q5U5Z8 902 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 Q7L0L9 218 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 CAMK1DQ8IU85 385 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 NXPE3Q969Y0 559 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 SLC24A2Q9UI40 661 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 DENND4AQ7Z401 1863 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 ZCWPW2A0A1B0GU75 182 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 HMGB1P1B2RPK0 211 aaPredicted RBP27.04■■□□□ 1.92
MSX1-201ENST00000382723 ALDH1A2O94788 518 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 PIGNO95427 931 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 ATP5BP06576 529 aaKnown RBP27.04■■□□□ 1.92
MSX1-201ENST00000382723 MSLNQ13421 630 aaPredicted RBP27.04■■□□□ 1.92
MSX1-201ENST00000382723 Q6ZVU0 165 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 BLOC1S5Q8TDH9 187 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 MRGPRX3Q96LB0 322 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 CEP44Q9C0F1 390 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 FAM169AQ9Y6X4 670 aa27.04■■□□□ 1.92
MSX1-201ENST00000382723 PRRT4C9JH25 899 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 ERVK-10P10266 1014 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 CSNK1DP48730 415 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 HTR4Q13639 388 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 CYP4X1Q8N118 509 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 PCDH20Q8N6Y1 951 aaKnown RBP27.03■■□□□ 1.92
MSX1-201ENST00000382723 ADGRE3Q9BY15 652 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 UBE2ZQ9H832 354 aaPredicted RBP27.03■■□□□ 1.92
MSX1-201ENST00000382723 ELOVL2Q9NXB9 296 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 PSMC3IPQ9P2W1 217 aaPredicted RBP27.03■■□□□ 1.92
MSX1-201ENST00000382723 PCDHB9Q9Y5E1 797 aa27.03■■□□□ 1.92
MSX1-201ENST00000382723 HEATR9A2RTY3 570 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 FAM159BA6NKW6 160 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 TTC34A8MYJ7 566 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 FOXO6A8MYZ6 492 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 DLDP09622 509 aaKnown RBP27.02■■□□□ 1.92
MSX1-201ENST00000382723 CA4P22748 312 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 NNMTP40261 264 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 MAPK8P45983 427 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 BCL2L1Q07817 233 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 TDRPQ86YL5 185 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 PTCD2Q8WV60 388 aaKnown RBP27.02■■□□□ 1.92
MSX1-201ENST00000382723 CERS2Q96G23 380 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 PPCSQ9HAB8 311 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 FETUBQ9UGM5 382 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 SLC2A6Q9UGQ3 507 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 IKBKGQ9Y6K9 419 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 OPRD1P41143 372 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 MAGOHP61326 146 aaKnown RBP27.02■■□□□ 1.92
MSX1-201ENST00000382723 PTPRNQ16849 979 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 MYLK3Q32MK0 819 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 CARD16Q5EG05 197 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 ESRP1Q6NXG1 681 aaKnown RBP27.02■■□□□ 1.92
MSX1-201ENST00000382723 LRRC6Q86X45 466 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 SFTPA1Q8IWL2 248 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 PAF1Q8N7H5 531 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 SMIM14Q96QK8 99 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 CDX2Q99626 313 aaPredicted RBP27.02■■□□□ 1.92
MSX1-201ENST00000382723 BRD9Q9H8M2 597 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 EURLQ9NYK6 297 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 SLC17A6Q9P2U8 582 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 LGALS13Q9UHV8 139 aa27.02■■□□□ 1.92
MSX1-201ENST00000382723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.01■■□□□ 1.91
MSX1-201ENST00000382723 UGT1A9O60656 530 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 GSRP00390 522 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 ASLP04424 464 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 ALADP13716 330 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 SLC8A1P32418 973 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 ITPRIPL2Q3MIP1 535 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 DPY19L3Q6ZPD9 716 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 CYS1Q717R9 158 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 RASSF3Q86WH2 238 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 RIBC1Q8N443 379 aaPredicted RBP27.01■■□□□ 1.91
MSX1-201ENST00000382723 DCAKDQ8WVC6 231 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 SLC44A1Q8WWI5 657 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 RANBP9Q96S59 729 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 DHRS4Q9BTZ2 278 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 ATP13A3Q9H7F0 1226 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 UGT1A7Q9HAW7 530 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 UGT1A10Q9HAW8 530 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 UGT1A8Q9HAW9 530 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 MRM3Q9HC36 420 aaKnown RBP27.01■■□□□ 1.91
MSX1-201ENST00000382723 C20orf96Q9NUD7 363 aaPredicted RBP27.01■■□□□ 1.91
MSX1-201ENST00000382723 PRKAG3Q9UGI9 489 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 KIF26AQ9ULI4 1882 aaPredicted RBP27.01■■□□□ 1.91
MSX1-201ENST00000382723 MIA3Q5JRA6 1907 aa27.01■■□□□ 1.91
MSX1-201ENST00000382723 ANHXE9PGG2 379 aa27■■□□□ 1.91
MSX1-201ENST00000382723 FAM155BO75949 473 aa27■■□□□ 1.91
MSX1-201ENST00000382723 INHBAP08476 426 aa27■■□□□ 1.91
MSX1-201ENST00000382723 BMP1P13497 986 aa27■■□□□ 1.91
MSX1-201ENST00000382723 CCNHP51946 323 aaPredicted RBP27■■□□□ 1.91
MSX1-201ENST00000382723 MGAT5Q09328 741 aa27■■□□□ 1.91
MSX1-201ENST00000382723 ARMC12Q5T9G4 340 aa27■■□□□ 1.91
MSX1-201ENST00000382723 TLCD1Q96CP7 247 aa27■■□□□ 1.91
MSX1-201ENST00000382723 MYO19Q96H55 970 aa27■■□□□ 1.91
MSX1-201ENST00000382723 STMN4Q9H169 189 aaPredicted RBP27■■□□□ 1.91
MSX1-201ENST00000382723 ZDHHC6Q9H6R6 413 aa27■■□□□ 1.91
MSX1-201ENST00000382723 PLA2G4CQ9UP65 541 aa27■■□□□ 1.91
MSX1-201ENST00000382723 EPHB1P54762 984 aa27■■□□□ 1.91
MSX1-201ENST00000382723 ADGRD1Q6QNK2 874 aa27■■□□□ 1.91
MSX1-201ENST00000382723 CDKL2Q92772 493 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms