RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 KCNK4Q9NYG8 393 aa17.53■□□□□ 0.4
HMGN1-203ENST00000380748 LRIT1Q9P2V4 623 aa17.53■□□□□ 0.4
HMGN1-203ENST00000380748 KLQ9UEF7 1012 aa17.53■□□□□ 0.4
HMGN1-203ENST00000380748 COQ6Q9Y2Z9 468 aa17.53■□□□□ 0.4
HMGN1-203ENST00000380748 OR1A2Q9Y585 309 aa17.53■□□□□ 0.4
HMGN1-203ENST00000380748 ANKRD17O75179 2603 aaKnown RBP17.53■□□□□ 0.4
HMGN1-203ENST00000380748 B4DGG1 531 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 P4HA2O15460 535 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 SRGAP2O75044 1071 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 ZNF202O95125 648 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 PNLIPP16233 465 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 ACVRL1P37023 503 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 WSCD2Q2TBF2 565 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 COBLL1Q53SF7 1204 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-203ENST00000380748 OGFOD3Q6PK18 319 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 SLC26A9Q7LBE3 791 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 DRC7Q8IY82 874 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 RCBTB1Q8NDN9 531 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 OR2AP1Q8NGE2 309 aa17.52■□□□□ 0.4
HMGN1-203ENST00000380748 INTS2Q9H0H0 1204 aaKnown RBP17.52■□□□□ 0.4
HMGN1-203ENST00000380748 UBE2TQ9NPD8 197 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-203ENST00000380748 AKAP7Q9P0M2 348 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-203ENST00000380748 PLEKHB1Q9UF11 243 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-203ENST00000380748 TMEM110-MUSTN1A8MSY1 372 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 GSRP00390 522 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 FGF3P11487 239 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-203ENST00000380748 HTR1BP28222 390 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 UGT1A3P35503 534 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 SULT1E1P49888 294 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 B4GALNT1Q00973 533 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 SLC6A3Q01959 620 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 ARHGEF7Q14155 803 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 HLTFQ14527 1009 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGN1-203ENST00000380748 LRRC14Q15048 493 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 MYLK3Q32MK0 819 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 C14orf28Q4W4Y0 310 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 ATXN7L2Q5T6C5 722 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-203ENST00000380748 LEKR1Q6ZMV7 388 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 C1orf131Q8NDD1 294 aaKnown RBP17.51■□□□□ 0.39
HMGN1-203ENST00000380748 FAM46DQ8NEK8 389 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 C1orf74Q96LT6 269 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 NUDT22Q9BRQ3 303 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 APOOQ9BUR5 198 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 OSBPL1AQ9BXW6 950 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 DAAM1Q9Y4D1 1078 aa17.51■□□□□ 0.39
HMGN1-203ENST00000380748 ZNF891A8MT65 544 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-203ENST00000380748 BECN2A8MW95 431 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 MTSS1O43312 755 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 POP4O95707 220 aaKnown RBP17.5■□□□□ 0.39
HMGN1-203ENST00000380748 RNASE9P60153 205 aaKnown RBP17.5■□□□□ 0.39
HMGN1-203ENST00000380748 DEUP1Q05D60 604 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 INPP5AQ14642 412 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 ARHGAP44Q17R89 818 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 AMZ1Q400G9 498 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 GDPD4Q6W3E5 623 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 TAF8Q7Z7C8 310 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 PIM3Q86V86 326 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 CACNA2D3Q8IZS8 1091 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 ZNF397Q8NF99 534 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-203ENST00000380748 GPBAR1Q8TDU6 330 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 OR1E3Q8WZA6 343 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 ARHGEF2Q92974 986 aaKnown RBP17.5■□□□□ 0.39
HMGN1-203ENST00000380748 WDR92Q96MX6 357 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 CATSPER2Q96P56 530 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 TAAR9Q96RI9 348 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 TBCBQ99426 244 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 ZYG11BQ9C0D3 744 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 CDH19Q9H159 772 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 RMND1Q9NWS8 449 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.5■□□□□ 0.39
HMGN1-203ENST00000380748 LRBAP50851 2863 aa17.5■□□□□ 0.39
HMGN1-203ENST00000380748 ANKRD36A6QL64 1941 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 ENO4A6NNW6 628 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 NKX2-8O15522 239 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 B4GAT1O43505 415 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 NUDT21O43809 227 aaKnown RBP17.49■□□□□ 0.39
HMGN1-203ENST00000380748 DUX1O43812 170 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 CPNE6O95741 557 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 TNFP01375 233 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 PRKAR1AP10644 381 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 TIMP2P16035 220 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 CD97P48960 835 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 OR1D5P58170 312 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 SNRPD1P62314 119 aaKnown RBP17.49■□□□□ 0.39
HMGN1-203ENST00000380748 POLD3Q15054 466 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-203ENST00000380748 PTPN20Q4JDL3 420 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 SPECC1LQ69YQ0 1117 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 GJB7Q6PEY0 223 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 PGAP3Q96FM1 320 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-203ENST00000380748 ABHD17AQ96GS6 310 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 NDFIP2Q9NV92 336 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 RRN3Q9NYV6 651 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 PCDHGA3Q9Y5H0 932 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 B3GALT1Q9Y5Z6 326 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 DGKBQ9Y6T7 804 aa17.49■□□□□ 0.39
HMGN1-203ENST00000380748 RP1L1Q8IWN7 2480 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-203ENST00000380748 ARHGEF17Q96PE2 2063 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms