RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 PIK3CGP48736 1102 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 IRX1P78414 480 aaPredicted RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 RBBP7Q16576 425 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 DCP1BQ8IZD4 617 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 DSELQ8IZU8 1212 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 ACMSDQ8TDX5 336 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 SLC2A13Q96QE2 648 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 TRIM4Q9C037 500 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 PFDN4Q9NQP4 134 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 STARD7Q9NQZ5 370 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 MID2Q9UJV3 735 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 LRCH1Q9Y2L9 728 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 DTNAQ9Y4J8 743 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 AKAP10O43572 662 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 B4GALT3O60512 393 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 AOC2O75106 756 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 SMNDC1O75940 238 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■□□ 16.2
DNMT3A-203ENST00000380746 LINC00032P0C843 101 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 THRAP10827 490 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 ITGAXP20702 1163 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 KCNA5P22460 613 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 RENBPP51606 427 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 THOP1P52888 689 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 CAPRIN1Q14444 709 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 TMEM259Q4ZIN3 620 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 TLDC1Q6P9B6 456 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 DBF4BQ8NFT6 615 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 KCNA7Q96RP8 456 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 ACBD6Q9BR61 282 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 C1orf50Q9BV19 199 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 MRPL46Q9H2W6 279 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 CASS4Q9NQ75 786 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 MARCH4Q9P2E8 410 aaPredicted RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 RCOR3Q9P2K3 495 aaPredicted RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 STX18Q9P2W9 335 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 PCDHB5Q9Y5E4 795 aa11.03□□□□□ -0.64
DNMT3A-203ENST00000380746 GABRDO14764 452 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 UBDO15205 165 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 SH3BGRLO75368 114 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 SRP72O76094 671 aaKnown RBP11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 C1QAP02745 245 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 GNAZP19086 355 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 GLDCP23378 1020 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 LRPAP1P30533 357 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 GALNT2Q10471 571 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 PRKAA1Q13131 559 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 C11orf91Q3C1V1 193 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 AGAP9Q5VTM2 703 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 FBXL22Q6P050 247 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 CARNMT1Q8N4J0 409 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 PTGR2Q8N8N7 351 aaPredicted RBP11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 TXNDC5Q8NBS9 432 aaKnown RBP11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 KLHDC9Q8NEP7 349 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 KCTD13Q8WZ19 329 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 IGSF8Q969P0 613 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 SERPINB11Q96P15 392 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 PCDHB12Q9Y5F1 795 aa11.02□□□□□ -0.64
DNMT3A-203ENST00000380746 A0A088AWK7 358 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 MANSC4A6NHS7 340 aaPredicted RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 SLC35E2BP0CK96 405 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 CCNFP41002 786 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 INHBEP58166 350 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 FASTKQ14296 549 aaKnown RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 RAB44Q7Z6P3 723 aaPredicted RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 AUTS2Q8WXX7 1259 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 RTP3Q9BQQ7 232 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 GMPR2Q9P2T1 348 aaKnown RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 PCDHB7Q9Y5E2 793 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 MAGEB16A2A368 324 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 FAM149AA5PLN7 773 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 SAC3D1A6NKF1 404 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 UBXN8O00124 270 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 SNNO75324 88 aaPredicted RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 GLP2RO95838 553 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 CTGFP29279 349 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 IL1RL1Q01638 556 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 MAPRE1Q15691 268 aaKnown RBP11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 SCD5Q86SK9 330 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 RNF180Q86T96 592 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 TMEM135Q86UB9 458 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 OR6Y1Q8NGX8 325 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 ECSITQ9BQ95 431 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 BATF3Q9NR55 127 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 RAP2CQ9Y3L5 183 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 TCAF1Q9Y4C2 921 aa11.02□□□□□ -0.65
DNMT3A-203ENST00000380746 IQCF5A8MTL0 148 aa11.01□□□□□ -0.65
DNMT3A-203ENST00000380746 F5H5T6 163 aa11.01□□□□□ -0.65
DNMT3A-203ENST00000380746 G3V2L1 256 aa11.01□□□□□ -0.65
DNMT3A-203ENST00000380746 MATN3O15232 486 aa11.01□□□□□ -0.65
DNMT3A-203ENST00000380746 ALDH2P05091 517 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms