RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 KCTD11Q693B1 232 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 SYDE1Q6ZW31 735 aaPredicted RBP18.94■□□□□ 0.62
SMN2-202ENST00000380742 HDDC3Q8N4P3 179 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 MMGT1Q8N4V1 131 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 PDCD7Q8N8D1 485 aaKnown RBP18.94■□□□□ 0.62
SMN2-202ENST00000380742 LRRN4CLQ8ND94 238 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 IPMKQ8NFU5 416 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 HCAR2Q8TDS4 363 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 PPP1R16AQ96I34 528 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 PPP1R2P1Q96PQ5 205 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 C1QTNF1Q9BXJ1 281 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 ITM2CQ9NQX7 267 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 FBXL12Q9NXK8 326 aa18.94■□□□□ 0.62
SMN2-202ENST00000380742 USP36Q9P275 1121 aaKnown RBP18.94■□□□□ 0.62
SMN2-202ENST00000380742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 ACADMP11310 421 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 TIMP2P16035 220 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 HOXA6P31267 233 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 ADRA1AP35348 466 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 P2RY2P41231 377 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 TPMTP51580 245 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 CSTF1Q05048 431 aaKnown RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 CDK18Q07002 472 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 OLIG2Q13516 323 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 SPARCL1Q14515 664 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 TTC31Q49AM3 519 aaPredicted RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 PIP5KL1Q5T9C9 394 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 BRAT1Q6PJG6 821 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 ERN2Q76MJ5 926 aaKnown RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 MAATS1Q7Z4T9 603 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 PIH1D2Q8WWB5 315 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 SPOCK2Q92563 424 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 FAM131CQ96AQ9 280 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 FEM1CQ96JP0 617 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 OMDQ99983 421 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 HDAC8Q9BY41 377 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 DYRK4Q9NR20 520 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 ARIH1Q9Y4X5 557 aaPredicted RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 ZNF318Q5VUA4 2279 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 DOCK9Q9BZ29 2069 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 LOC285095A0A1B0GVY8 99 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 FAM187AA6NFU0 413 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 RNASEH2AO75792 299 aaKnown RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 CPP00450 1065 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 AGTP01019 485 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 ADRB3P13945 408 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 ITIH2P19823 946 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 CA4P22748 312 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 IVDP26440 423 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 ABL2P42684 1182 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 TERF1P54274 439 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 BASP1P80723 227 aaKnown RBP18.93■□□□□ 0.62
SMN2-202ENST00000380742 GALNT3Q14435 633 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 UGP2Q16851 508 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 LRRC73Q5JTD7 316 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 CFAP58Q5T655 872 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 AGBL4Q5VU57 503 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 USP30Q70CQ3 517 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 PAF1Q8N7H5 531 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 GANCQ8TET4 914 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 IFT43Q96FT9 208 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 SMIM14Q96QK8 99 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 LRFN3Q9BTN0 628 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 LRRC1Q9BTT6 524 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 FICDQ9BVA6 458 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 NEUROG2Q9H2A3 272 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 ASIC3Q9UHC3 531 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 FBXO4Q9UKT5 387 aa18.93■□□□□ 0.62
SMN2-202ENST00000380742 A0A1W2PQ67 120 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 AXIN1O15169 862 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 USP12O75317 370 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 AP2A1O95782 977 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 EPOP01588 193 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 IGLV3-19P01714 112 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 PRKCGP05129 697 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 ADCY8P40145 1251 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 CHRNA4P43681 627 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 FNTBP49356 437 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 NEK3P51956 506 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 TAS2R38P59533 333 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 PTPRRQ15256 657 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 C8orf74Q6P047 294 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 FBXL19Q6PCT2 694 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 RANBP10Q6VN20 620 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 TTC7BQ86TV6 843 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 FAM124AQ86V42 546 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 KBTBD6Q86V97 674 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 FRMD1Q8N878 549 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 LPCAT1Q8NF37 534 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 CCHCR1Q8TD31 782 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 RLN3Q8WXF3 142 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 APOL2Q9BQE5 337 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 FZD4Q9ULV1 537 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 PHTF1Q9UMS5 762 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 CYP8B1Q9UNU6 501 aa18.92■□□□□ 0.62
SMN2-202ENST00000380742 WDFY4Q6ZS81 3184 aa18.91■□□□□ 0.62
SMN2-202ENST00000380742 TCRBV7S3A2A0A539 114 aa18.91■□□□□ 0.62
SMN2-202ENST00000380742 GOLGA6CA6NDK9 693 aa18.91■□□□□ 0.62
SMN2-202ENST00000380742 GOLGA6BA6NDN3 693 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms