RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GANQ9H2C0 597 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 FAM207AQ9NSI2 230 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-202ENST00000380276 SEPT11Q9NVA2 429 aaKnown RBP23.36■■□□□ 1.33
U2AF1-202ENST00000380276 TOR1BO14657 336 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 INSIG1O15503 277 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 CREB3O43889 395 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 ALPIP09923 528 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 TIMP2P16035 220 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 EEF1GP26641 437 aaKnown RBP23.35■■□□□ 1.33
U2AF1-202ENST00000380276 NSFP46459 744 aaKnown RBP23.35■■□□□ 1.33
U2AF1-202ENST00000380276 ELP6Q0PNE2 266 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 LRRC14Q15048 493 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 JAMLQ86YT9 394 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 FSTL5Q8N475 847 aaPredicted RBP23.35■■□□□ 1.33
U2AF1-202ENST00000380276 ARL10Q8N8L6 244 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 RTL3Q8N8U3 475 aaKnown RBP23.35■■□□□ 1.33
U2AF1-202ENST00000380276 KYQ8NBH2 561 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 CASKIN2Q8WXE0 1202 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 CCDC74AQ96AQ1 378 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 HMCESQ96FZ2 354 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 KLC2Q9H0B6 622 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 ADAM22Q9P0K1 906 aa23.35■■□□□ 1.33
U2AF1-202ENST00000380276 CDRT15L2A8MXV6 281 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 RASGRP1O95267 797 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 PCCBP05166 539 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 TPM2P07951 284 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 CHRNB2P17787 502 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 HTR1BP28222 390 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 SOX5P35711 763 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 SYCP1Q15431 976 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 TRIM72Q6ZMU5 477 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 SDR16C5Q8N3Y7 309 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 PAF1Q8N7H5 531 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 TTC9Q92623 222 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 NTAN1Q96AB6 310 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 PCMTD1Q96MG8 357 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-202ENST00000380276 GFM1Q96RP9 751 aaKnown RBP23.34■■□□□ 1.33
U2AF1-202ENST00000380276 EDEM3Q9BZQ6 932 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 GPR34Q9UPC5 381 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 CHD5Q8TDI0 1954 aa23.34■■□□□ 1.33
U2AF1-202ENST00000380276 RASA4BC9J798 803 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 K7ENP7 123 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 AGRPO00253 132 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 RASA4O43374 803 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 RFC1P35251 1148 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-202ENST00000380276 HK3P52790 923 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 PDX1P52945 283 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 CLN3Q13286 438 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 ALG11Q2TAA5 492 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 INO80DQ53TQ3 878 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-202ENST00000380276 INO80CQ6PI98 192 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-202ENST00000380276 GKN2Q86XP6 184 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 FBXO39Q8N4B4 442 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 CENPIQ92674 756 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-202ENST00000380276 VOPP1Q96AW1 172 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 CPEB1Q9BZB8 566 aaKnown RBP23.33■■□□□ 1.33
U2AF1-202ENST00000380276 NUP62CLQ9H1M0 184 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 DKK3Q9UBP4 350 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 KLQ9UEF7 1012 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 DAAM1Q9Y4D1 1078 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 OR1A2Q9Y585 309 aa23.33■■□□□ 1.33
U2AF1-202ENST00000380276 TMEM110-MUSTN1A8MSY1 372 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 PYCARD-AS1I3L0S3 204 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 RPLP0P05388 317 aaKnown RBP23.32■■□□□ 1.32
U2AF1-202ENST00000380276 ITGA2BP08514 1039 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 KRT10P13645 584 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 C6P13671 934 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 STAT1P42224 750 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 SKOR1P84550 965 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 NFATC4Q14934 902 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 WSCD2Q2TBF2 565 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 TMEM52BQ4KMG9 183 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 FKBP15Q5T1M5 1219 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 ERAP2Q6P179 960 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 WDR59Q6PJI9 974 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 B3GNT8Q7Z7M8 397 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 CLEC14AQ86T13 490 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 FOXP3Q9BZS1 431 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 STRADBQ9C0K7 418 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 NOL6Q9H6R4 1146 aaKnown RBP23.32■■□□□ 1.32
U2AF1-202ENST00000380276 CATSPERBQ9H7T0 1116 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 LHX3Q9UBR4 397 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 UBA2Q9UBT2 640 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-202ENST00000380276 RABGEF1Q9UJ41 708 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 RP1P56715 2156 aa23.32■■□□□ 1.32
U2AF1-202ENST00000380276 KALRNO60229 2985 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 ANKRD62A6NC57 917 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 PLD2O14939 933 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 CCP110O43303 1012 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 CALB1P05937 261 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 MLLT3P42568 568 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-202ENST00000380276 PEX5P50542 639 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 YBEYP58557 167 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-202ENST00000380276 SRP54P61011 504 aaKnown RBP23.31■■□□□ 1.32
U2AF1-202ENST00000380276 CCL7P80098 99 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 INPP5AQ14642 412 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 RAB11FIP2Q7L804 512 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 DNAAF5Q86Y56 855 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 ATL2Q8NHH9 583 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 LIN37Q96GY3 246 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms