RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TROVE2P10155 538 aaKnown RBP eCLIP20■□□□□ 0.79
PDLIM5-205ENST00000380180 PGGT1BP53609 377 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 CDH18Q13634 790 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 USP10Q14694 798 aaKnown RBP20■□□□□ 0.79
PDLIM5-205ENST00000380180 CLEC14AQ86T13 490 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 FITM2Q8N6M3 262 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 TDRD5Q8NAT2 981 aaKnown RBP20■□□□□ 0.79
PDLIM5-205ENST00000380180 RAB3IL1Q8TBN0 382 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 HDAC10Q969S8 669 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 ALG14Q96F25 216 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 SMG9Q9H0W8 520 aaKnown RBP20■□□□□ 0.79
PDLIM5-205ENST00000380180 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20■□□□□ 0.79
PDLIM5-205ENST00000380180 ZNF510Q9Y2H8 683 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 USH1CQ9Y6N9 552 aa20■□□□□ 0.79
PDLIM5-205ENST00000380180 CCL22O00626 93 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 RFPL2O75678 378 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 TMCC1O94876 653 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 PIRTP0C851 137 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 CES1P23141 567 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 ALDH3A1P30838 453 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 CSKP41240 450 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 LIG3P49916 1009 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 ARSDP51689 593 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 PCLAFQ15004 111 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 RAPH1Q70E73 1250 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 MFN1Q8IWA4 741 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 MFSD6LQ8IWD5 586 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 RFWD2Q8NHY2 731 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 CALML6Q8TD86 181 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 BRSK1Q8TDC3 778 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 NUDCD1Q96RS6 583 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 ARL5AQ9Y689 179 aa19.99■□□□□ 0.79
PDLIM5-205ENST00000380180 LEFTY2O00292 366 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 HGSO14964 777 aaPredicted RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 AURKAO14965 403 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 TGDSO95455 350 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 KCNA4P22459 653 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 CCDC153Q494R4 210 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 ZCCHC23Q6ZST2 131 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 TPGS1Q6ZTW0 290 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 PTAR1Q7Z6K3 402 aaPredicted RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 SLC41A1Q8IVJ1 513 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 CPXM2Q8N436 756 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 OR6P1Q8NGX9 317 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 TRIM55Q9BYV6 548 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 MCOLN1Q9GZU1 580 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 ZNF395Q9H8N7 513 aaPredicted RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 PLK2Q9NYY3 685 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 DCTN4Q9UJW0 460 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 GBF1Q92538 1859 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 FAM95CA0A1B0GW59 222 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 PHGDHO43175 533 aaKnown RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 SLC7A4O43246 635 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 BUD23O43709 281 aaKnown RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 UBOX5O94941 541 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 AVPR1AP37288 418 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 CD151P48509 253 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 PTPRCAPQ14761 206 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 DBN1Q16643 649 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 INO80DQ53TQ3 878 aaPredicted RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 ZNF789Q5FWF6 425 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 KIAA0408Q6ZU52 694 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 TCEAL4Q96EI5 215 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 FBXO6Q9NRD1 293 aaPredicted RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 COPG2Q9UBF2 871 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 VPS51Q9UID3 782 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 TLK1Q9UKI8 766 aa19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 ARIH1Q9Y4X5 557 aaPredicted RBP19.98■□□□□ 0.79
PDLIM5-205ENST00000380180 PRLP01236 227 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PDHA1P08559 390 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 IRS1P35568 1242 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 SCTRP47872 440 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 POLD2P49005 469 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PRAMEP78395 509 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 OCRLQ01968 901 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 ACTN3Q08043 901 aaPredicted RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 STX3Q13277 289 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 LAMB3Q13751 1172 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 MBLAC2Q68D91 279 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CNSTQ6PJW8 725 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 C10orf107Q8IVU9 208 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 TNS4Q8IZW8 715 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 APCDD1Q8J025 514 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PNPLA1Q8N8W4 532 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 GABPB2Q8TAK5 448 aaPredicted RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 SHKBP1Q8TBC3 707 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 RMDN1Q96DB5 314 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 TBATAQ96M53 351 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 C7orf26Q96N11 449 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 TDRD1Q9BXT4 1180 aaKnown RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 C20orf27Q9GZN8 174 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 MFSD1Q9H3U5 465 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 ACTR5Q9H9F9 607 aaPredicted RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 CLEC4EQ9ULY5 219 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PCDHGC4Q9Y5F7 938 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 OR51F1A6NGY5 319 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 SNNO75324 88 aaPredicted RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 FGF3P11487 239 aaPredicted RBP19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 MYOGP15173 224 aa19.97■□□□□ 0.79
PDLIM5-205ENST00000380180 PFKLP17858 780 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms