RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ENPEPQ07075 957 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 FOXR2Q6PJQ5 311 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 CCDC80Q76M96 950 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 METTL16Q86W50 562 aaKnown RBP13.36□□□□□ -0.27
HIPK3-202ENST00000379016 C8orf48Q96LL4 319 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 CATSPERZQ9NTU4 200 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 TRBV23OR9-2A0A075B6M9 112 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 VSTM5A8MXK1 200 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 H3BUI4 141 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 SCAMP1O15126 338 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 TULP3O75386 442 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 AFF1P51825 1210 aaKnown RBP13.36□□□□□ -0.27
HIPK3-202ENST00000379016 PPIL2Q13356 520 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 XKR6Q5GH73 641 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 KCNMB4Q86W47 210 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 SLC22A15Q8IZD6 547 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 DNASE1L2Q92874 299 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 TMEM216Q9P0N5 145 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 C15orf38-AP3S2A0A0A6YYH1 394 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
HIPK3-202ENST00000379016 RIPK2O43353 540 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 RLN2P04090 185 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 HTR1BP28222 390 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 USP11P51784 963 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 ZBTB6Q15916 424 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 ALG10BQ5I7T1 473 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 PRAMEF17Q5VTA0 474 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 FAM240BA0A1B0GVZ2 78 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 CCNOP22674 350 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 CDH11P55287 796 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 PRKCDQ05655 676 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 THAP5Q7Z6K1 395 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 ADAM32Q8TC27 787 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
HIPK3-202ENST00000379016 PPEF2O14830 753 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 NT5EP21589 574 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 MANFP55145 182 aaKnown RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 LACTB2Q53H82 288 aaPredicted RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 QSOX2Q6ZRP7 698 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 DNAJB14Q8TBM8 379 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 FEM1CQ96JP0 617 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 CDRT15Q96T59 188 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ERP44Q9BS26 406 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 TIPINQ9BVW5 301 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 MRASO14807 208 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 AHCYP23526 432 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 SF1Q15637 639 aaKnown RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ADNP2Q6IQ32 1131 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ZNF280DQ6N043 979 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 MED28Q9H204 178 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 TREM1Q9NP99 234 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 SNTG1Q9NSN8 517 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 CLIC5Q9NZA1 410 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 A0A0G2JPF8 293 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 HNRNPCL3B7ZW38 293 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ZSCAN5DPP0CG00 497 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 HNRNPCL4P0DMR1 293 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 CBLBQ13191 982 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ACAD10Q6JQN1 1059 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 GHDCQ8N2G8 530 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 SLC27A6Q9Y2P4 619 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 GNRH1P01148 92 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 NUDT17P0C025 328 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 OR3A3P47888 321 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 OR3A2P47893 321 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 RBM23Q86U06 439 aaKnown RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 AGPAT5Q9NUQ2 364 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 FKBP6O75344 327 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 TKTL1P51854 596 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 MRPS22P82650 360 aaKnown RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 BNIP3Q12983 259 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 STOX2Q9P2F5 926 aaPredicted RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 ALG5Q9Y673 324 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 KCNJ13O60928 360 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 GNAO1P09471 354 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 CYP11B1P15538 503 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 MAGEA6P43360 314 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 PUM1Q14671 1186 aaKnown RBP eCLIP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 KLHL26Q53HC5 615 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 N4BP2L1Q5TBK1 243 aaPredicted RBP13.35□□□□□ -0.27
HIPK3-202ENST00000379016 NMRAL1Q9HBL8 299 aa13.35□□□□□ -0.27
HIPK3-202ENST00000379016 MED24O75448 989 aa13.34□□□□□ -0.27
HIPK3-202ENST00000379016 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms