RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 C8orf48Q96LL4 319 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 UTRNP46939 3433 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 A0A087X1B8 175 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 MTMR11A4FU01 709 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 CD3EAPO15446 510 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SNUPNO95149 360 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 ATP5F1P24539 256 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 MRPS35P82673 323 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 CYLC2Q14093 348 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 TRIP10Q15642 601 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SERPINA13PQ6UXR4 307 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 GPSM1Q86YR5 675 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 TRIML2Q8N7C3 387 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 STAG3L4Q8TBR4 150 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 OSGEPL1Q9H4B0 414 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 CLIC5Q9NZA1 410 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 EVLQ9UI08 416 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SLC13A4Q9UKG4 626 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 RAI2Q9Y5P3 530 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 RAD51BO15315 384 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 EEF1B2P24534 225 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 MAPKAPK2P49137 400 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 CDH4P55283 916 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 STARD3Q14849 445 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 FAM45BPQ6NSW5 357 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 ICA1LQ8NDH6 482 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 METTL6Q8TCB7 284 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 FAM45AQ8TCE6 357 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 PANX3Q96QZ0 392 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 HERPUD2Q9BSE4 406 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 SLC28A3Q9HAS3 691 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 EDF1O60869 148 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 OR56A5P0C7T3 313 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 IGFBP4P22692 258 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 CES1P23141 567 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 PPIDQ08752 370 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 ILF2Q12905 390 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 MPPE1Q53F39 396 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 RARS2Q5T160 578 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 TPGS2Q68CL5 300 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 RNF217Q8TC41 542 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 TMEM174Q8WUU8 243 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 KCNK4Q9NYG8 393 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 LGALS13Q9UHV8 139 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 HAS3O00219 553 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 TSPAN8P19075 237 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 NMBRP28336 390 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 HALP42357 657 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 GRIA4P48058 902 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 PFKPQ01813 784 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 FLOT2Q14254 428 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 NMD3Q96D46 503 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 HAUS8Q9BT25 410 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 SMOC2Q9H3U7 446 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 APPL1Q9UKG1 709 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 SCML2Q9UQR0 700 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 LZTS1Q9Y250 596 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 PLLPQ9Y342 182 aa14.28□□□□□ -0.12
SHROOM1-203ENST00000378679 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 CYP2A6P11509 494 aaPredicted RBP14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 RPL14P50914 215 aaKnown RBP14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 CYP4F8P98187 520 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 IL10RBQ08334 325 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 ZNF252P-AS1Q0IIN9 211 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 TXNDC8Q6A555 127 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 ARCQ7LC44 396 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 GPRIN1Q7Z2K8 1008 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 C10orf107Q8IVU9 208 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 SCUBE1Q8IWY4 988 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 PTGR2Q8N8N7 351 aaPredicted RBP14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 ZNF461Q8TAF7 563 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 AZIN2Q96A70 460 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 PNPLA8Q9NP80 782 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 HS3ST4Q9Y661 456 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 GJA1P17302 382 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 HCAR3P49019 387 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 CCNG1P51959 295 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 TRMT11Q7Z4G4 463 aaKnown RBP14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 DSG4Q86SJ6 1040 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 TDRPQ86YL5 185 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 MPP5Q8N3R9 675 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 TMEM175Q9BSA9 504 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 SPASTQ9UBP0 616 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 VTI1BQ9UEU0 232 aa14.27□□□□□ -0.12
SHROOM1-203ENST00000378679 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 ARHGAP10A1A4S6 786 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 MC4RP32245 332 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 SLC10A7Q0GE19 358 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 EML3Q32P44 896 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 MSS51Q4VC12 460 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 NKAPQ8N5F7 415 aaKnown RBP14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 CCDC138Q96M89 665 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 ASPSCR1Q9BZE9 553 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 ZNF212Q9UDV6 495 aa14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 EIF3LQ9Y262 564 aaKnown RBP14.27□□□□□ -0.13
SHROOM1-203ENST00000378679 USP1O94782 785 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms