RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 MAGED1Q9Y5V3 778 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 E2F8A0AVK6 867 aa8.79□□□□□ -1
LIG3-202ENST00000378526 EME2A4GXA9 379 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 OR6C6A6NF89 314 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ANKDD1BA6NHY2 528 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SULT1C2O00338 296 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CST8O60676 142 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CDH1P12830 882 aa8.79□□□□□ -1
LIG3-202ENST00000378526 TUBG1P23258 451 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ST3GAL1Q11201 340 aa8.79□□□□□ -1
LIG3-202ENST00000378526 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 HSDL1Q3SXM5 330 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PLEKHN1Q494U1 663 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 RBM48Q5RL73 367 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 GALNTL5Q7Z4T8 443 aa8.79□□□□□ -1
LIG3-202ENST00000378526 FEZF2Q8TBJ5 459 aa8.79□□□□□ -1
LIG3-202ENST00000378526 QRFPRQ96P65 431 aa8.79□□□□□ -1
LIG3-202ENST00000378526 C7orf50Q9BRJ6 194 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ZNF700Q9H0M5 742 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PRMT8Q9NR22 394 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 TMEM9Q9P0T7 183 aa8.79□□□□□ -1
LIG3-202ENST00000378526 TNPO3Q9Y5L0 923 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ZDHHC11BP0C7U3 371 aa8.79□□□□□ -1
LIG3-202ENST00000378526 AGTR1P30556 359 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ELK3P41970 407 aa8.79□□□□□ -1
LIG3-202ENST00000378526 NR2C2P49116 596 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PRELPP51888 382 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ABCA11PQ4W5N1 156 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ALG10Q5BKT4 473 aa8.79□□□□□ -1
LIG3-202ENST00000378526 RNASEH2BQ5TBB1 312 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 FAM171BQ6P995 826 aa8.79□□□□□ -1
LIG3-202ENST00000378526 HID1Q8IV36 788 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SLC22A8Q8TCC7 542 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PPA2Q9H2U2 334 aa8.79□□□□□ -1
LIG3-202ENST00000378526 DNAJB4Q9UDY4 337 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ACSL5Q9ULC5 683 aa8.79□□□□□ -1
LIG3-202ENST00000378526 IDO1P14902 403 aa8.79□□□□□ -1
LIG3-202ENST00000378526 RPL10AP62906 217 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 PCSK7Q16549 785 aa8.79□□□□□ -1
LIG3-202ENST00000378526 BOLA3Q53S33 107 aa8.79□□□□□ -1
LIG3-202ENST00000378526 C3orf33Q6P1S2 294 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ZNF621Q6ZSS3 439 aa8.79□□□□□ -1
LIG3-202ENST00000378526 SVOPLQ8N434 492 aa8.79□□□□□ -1
LIG3-202ENST00000378526 DNAAF1Q8NEP3 725 aa8.79□□□□□ -1
LIG3-202ENST00000378526 PPP1R13LQ8WUF5 828 aa8.79□□□□□ -1
LIG3-202ENST00000378526 DCAF5Q96JK2 942 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ACE2Q9BYF1 805 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 YTHDF1Q9BYJ9 559 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 IRX2Q9BZI1 471 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ARAP1Q96P48 1450 aa8.79□□□□□ -1
LIG3-202ENST00000378526 FPGTO14772 594 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CYP1A1P04798 512 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 SLC2A3P11169 496 aa8.79□□□□□ -1
LIG3-202ENST00000378526 FMO5P49326 533 aa8.79□□□□□ -1
LIG3-202ENST00000378526 ASTE1Q2TB18 679 aaPredicted RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ANKDD1AQ495B1 522 aa8.79□□□□□ -1
LIG3-202ENST00000378526 DCST2Q5T1A1 773 aa8.79□□□□□ -1
LIG3-202ENST00000378526 CRTC1Q6UUV9 634 aa8.79□□□□□ -1
LIG3-202ENST00000378526 BEND5Q7L4P6 421 aa8.79□□□□□ -1
LIG3-202ENST00000378526 AENQ8WTP8 325 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 KAT8Q9H7Z6 458 aaKnown RBP8.79□□□□□ -1
LIG3-202ENST00000378526 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
LIG3-202ENST00000378526 FLT1P17948 1338 aa8.78□□□□□ -1
LIG3-202ENST00000378526 TVP23AA6NH52 213 aa8.78□□□□□ -1
LIG3-202ENST00000378526 MTHFD1P11586 935 aaKnown RBP8.78□□□□□ -1
LIG3-202ENST00000378526 RAB3BP20337 219 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SMAD1Q15797 465 aaKnown RBP8.78□□□□□ -1
LIG3-202ENST00000378526 CERCAMQ5T4B2 595 aa8.78□□□□□ -1
LIG3-202ENST00000378526 N4BP2L1Q5TBK1 243 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 MIB1Q86YT6 1006 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SCN4BQ8IWT1 228 aa8.78□□□□□ -1
LIG3-202ENST00000378526 POU5F2Q8N7G0 328 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SLC37A3Q8NCC5 494 aa8.78□□□□□ -1
LIG3-202ENST00000378526 IPCEF1Q8WWN9 437 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 TOP1MTQ969P6 601 aa8.78□□□□□ -1
LIG3-202ENST00000378526 MARK4Q96L34 752 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PPP3R2Q96LZ3 170 aa8.78□□□□□ -1
LIG3-202ENST00000378526 OR2M4Q96R27 311 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ACTR8Q9H981 624 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PI4KBQ9UBF8 816 aa8.78□□□□□ -1
LIG3-202ENST00000378526 UHRF1BP1LA0JNW5 1464 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PCF11O94913 1555 aaKnown RBP8.78□□□□□ -1
LIG3-202ENST00000378526 A0A088AWK7 358 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SGCEO43556 437 aa8.78□□□□□ -1
LIG3-202ENST00000378526 GYPCP04921 128 aa8.78□□□□□ -1
LIG3-202ENST00000378526 CYP11B2P19099 503 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ZNF10P21506 573 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 CRADDP78560 199 aa8.78□□□□□ -1
LIG3-202ENST00000378526 HTRA4P83105 476 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 ZNF529Q6P280 563 aa8.78□□□□□ -1
LIG3-202ENST00000378526 GTF2H5Q6ZYL4 71 aa8.78□□□□□ -1
LIG3-202ENST00000378526 NEK7Q8TDX7 302 aa8.78□□□□□ -1
LIG3-202ENST00000378526 CCDC74AQ96AQ1 378 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ZNF408Q9H9D4 720 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PCDH9Q9HC56 1237 aa8.78□□□□□ -1
LIG3-202ENST00000378526 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
LIG3-202ENST00000378526 MALT1Q9UDY8 824 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PCDHGC5Q9Y5F6 944 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ARHGEF10O15013 1369 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms